Helicobacter pylori P08204 |
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Putative Helicobacter pylori P08204 RM systems
Ref: Choi,J.G. et al. unpublished
REBASE ref # 37993
Complete sequence: 1,575,503 bp
GenBank #: CP141771
REBASE acronym: Hpy04
Org_num: 73863
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyV009ORF4655P (72% identity) | GCANNNNNNTG | Hpy04ORFSP |
| ??? | M | M.HpyK022IX (98% identity) | GCANNNNNNTG | M.Hpy04ORFSP |
| ??? | S | S.HpySP703ORF2125P (96% identity) | GCANNNNNNTG | S.Hpy04ORFSP |
| ??? | R | Hpyfe23ORF7685P (97% identity) | CRTANNNNNNNTC | Hpy04ORFKP |
| ??? | M | M.HpyK041XII (97% identity) | CRTANNNNNNNTC | M.Hpy04ORFKP |
| ??? | S | S.HpyK117ORF7345P (99% identity) | CRTANNNNNNNTC | S.Hpy04ORFKP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | Hpy05ORFCP (90% identity) | Hpy04ORFIP | |
| ??? | RM | HpySG36ORF7025P (98% identity) | CYANNNNNNTTC | Hpy04ORFHP |
| ??? | S | S.HpyMA23ORF6940P (50% identity) | S.Hpy04ORFHAP | |
| ??? | S | S.HpyCA23ORF6820P (43% identity) | S.Hpy04ORFHBP | |
| ??? | R | Hpyfe27ORF1490P (96% identity) | CATG | Hpy04ORFFP |
| ??? | M | M.HpyTW09I (98% identity) | CATG | M.Hpy04ORFFP |
| ??? | R | Hpyfe58ORF1625P (99% identity) | TCNGA | Hpy04ORFEP |
| ??? | M | M.HpyQ35ORFUP (98% identity) | TCNGA | M.Hpy04ORFEP |
| ??? | M | M.HpyGU82AORFGP (98% identity) | GCGC | M.Hpy04ORFDP |
| ??? | R | HpyK114XIVP (100% identity) | TCNNGA | Hpy04ORFCP |
| ??? | M | M.Hpyfe55ORF2075P (98% identity) | TCNNGA | M.Hpy04ORFCP |
| ??? | M | M.Hpy274ORF1066P (97% identity) | GTNNAC | M.Hpy04ORFBP |
| ??? | R | Hpyfe23ORF2875P (90% identity) | GTNNAC | Hpy04ORFBP |
| ??? | R | Hpyfe110ORF5235P (96% identity) | ACGT | Hpy04ORFVP |
| ??? | M | M.HpyUM038ORF8675P (98% identity) | ACGT | M.Hpy04ORFVP |
| ??? | R | Hpyfe10ORF4935P (100% identity) | ACNGT | Hpy04ORFUP |
| ??? | M | M.HpyPE102II (98% identity) | ACNGT | M.Hpy04ORFUP |
| ??? | M | M.HpyPU002ORF2235P (92% identity) | M.Hpy04ORFTP | |
| ??? | M | M.Hpyfe65ORF5760P (99% identity) | CCGG | M.Hpy04ORFRP |
| ??? | R | HpyMA20IIP (92% identity) | CCGG | Hpy04ORFRP |
| ??? | M | M.HpyK111VIII (99% identity) | TCGA | M.Hpy04ORFQP |
| ??? | R | R2.HpyK118ORF1135P (97% identity) | R1.Hpy04ORFWP | |
| ??? | R | R1.HpyP96ORFJP (98% identity) | R2.Hpy04ORFWP | |
| ??? | M | M.Hpyfe10ORF6760P (98% identity) | GATC | M.Hpy04ORFPP |
| ??? | R | HpyK117VIIP (96% identity) | GATC | Hpy04ORFPP |
| ??? | M | M2.HpySP204IVP (78% identity) | M1.Hpy04ORFOP | |
| ??? | M | M.Hpy198ORFAP (87% identity) | CCTC | M2.Hpy04ORFOP |
| ??? | R | Hpyfe78ORF7050P (99% identity) | GANTC | Hpy04ORFNP |
| ??? | M | M.Hpyfe99ORF7240P (99% identity) | GANTC | M.Hpy04ORFNP |
| ??? | R | Hpyfe88ORF6905P (97% identity) | GAAGA | Hpy04ORFMP |
| ??? | M | M2.HpyOK311ORFRP (100% identity) | GAAGA | M1.Hpy04ORFMP |
| ??? | M | M2.Hpy928ORFFP (100% identity) | GAAGA | M2.Hpy04ORFMP |
| ??? | R | HpyOK212ORFGP (60% identity) | Hpy04ORFLP | |
| ??? | M | M.HpyMA22VIII (67% identity) | M.Hpy04ORFLP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.HpyP33ORFIP (97% identity) | M.Hpy04ORFJP | |
| ??? | R | HpyOK212ORFEP (97% identity) | Hpy04ORFJP | |
| ??? | R | Hpyfe37ORF625P (39% identity) | Hpy04ORFGP | |
| ??? | M | M.HpyAL02ORFVP (96% identity) | M.Hpy04ORFGP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyH017GmrSDP (76% identity) | Hpy04GmrSD2P | |
| ??? | R | HpyYN483GmrSD2P (96% identity) | Hpy04GmrSDP | |