Fusobacterium polymorphum NCTC 10562 |
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Putative Fusobacterium polymorphum NCTC 10562 RM systems
Ref: Crowley,C. et al. unpublished
REBASE ref # 38059
Complete sequence: 2,444,283 bp
GenBank #: CP141275
REBASE acronym: Fpo10562
Org_num: 73859
All begin VKN78_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2990 | ATP-binding protein | |||
| 2995 | R | FnuPORF1312P (100% identity) | Fpo10562ORF3030P | |
| 3000 | site-specific tyrosine recombinase/integron | |||
| 3005 | Fic family protein | |||
| 3010 | transposase | |||
| 3015 | Fic family protein | |||
| 3020 | S | S2.FnuPORF1312P (100% identity) | S2.Fpo10562ORF3030P | |
| 3025 | S | S1.FnuPORF1312P (100% identity) | S1.Fpo10562ORF3030P | |
| 3030 | M | M.FnuSSMR1ORF7925P (100% identity) | M.Fpo10562ORF3030P | |
| 3035 | metal ABC transporter permease | |||
| 5560 | SPFH domain-containing protein | |||
| 5565 | R | FnuSSMR1ORF10495P (100% identity) | Fpo10562ORF5585P | |
| 5570 | S | S2.FnuPORF1590P (100% identity) | GGANNNNNNNNTAG | S2.Fpo10562ORF5585P |
| 5575 | S | S1.FnuPORF1590P (99% identity) | CTANNNNNNNNTYTC | S1.Fpo10562ORF5585P |
| 5580 | ATP-binding protein | |||
| 5585 | M | M.FnuSSMR1ORF10495P (100% identity) | M.Fpo10562ORF5585P | |
| 5590 | RadB family lipoprotein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4340 | glutamine--fructose-6-phosphate transaminase | |||
| 4345 | M | M.FnuSSMR1ORF9245P (100% identity) | ATGCAT | M.Fpo10562ORF4345P |
| 4350 | restriction endonuclease | |||
| 4345 | adenine-specific DNA-methyltransferase | |||
| 4350 | R | FnuSSMR1ORF9250P (100% identity) | ATGCAT | Fpo10562ORF4350P |
| 4355 | 486 aa hypothetical protein | |||
| 6240 | biotin--[acetyl-CoA-carboxylase] ligase | |||
| 6245 | M | M.Fpo43A3ORF9130P (100% identity) | GCATC | M.Fpo10562ORF6245P |
| 6250 | ArsB/NhaD family transporter | |||
| 6960 | 42 aa hypothetical protein | |||
| 6965 | R | FnuSSMR1ORF11905P (100% identity) | GATC | Fpo10562ORF6970P |
| 6970 | M | M.FnuSSMR1ORF11905P (100% identity) | GATC | M.Fpo10562ORF6970P |
| 6975 | C | C.FnuSSMR1ORF11905P (100% identity) | C.Fpo10562ORF6970P | |
| 6980 | type II toxin-antitoxin system YafQ family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3420 | 166 aa hypothetical protein | |||
| 3425 | R | Fnu10953bGmrSDP (100% identity) | Fpo10562GmrSDP | |
| 3430 | ABC transporter ATP-binding protein | |||
| 7815 | DEAD/DEAH box helicase | |||
| 7820 | R | FnuSSMR1ORF780P (100% identity) | Fpo10562ORF7820P | |
| 7825 | RidA family protein | |||