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Putative Escherichia coli KE54 RM systems
Ref: Hogins,J. et al. unpublished
REBASE ref # 37990
Sequence length: | GenBank #: | |
Chromosome: | 5,293,947 bp | CP141079 |
plasmid unnamed1: | 161,809 bp | CP141078 |
REBASE acronym: EcoKE54
Org_num: 73583
All begin U8P25_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
14110 | 400 aa hypothetical protein | |||
14115 | M | M.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | M.EcoKE54ORF14115P |
14120 | AAA family ATPase | |||
14125 | S | S.Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | S.EcoKE54ORF14115P |
14130 | DNA binding domain-containing protein | |||
14135 | histidinol-phosphatase | |||
14140 | R | Sma1978ORFBP (100% identity) | ACGNNNNNGTTG | EcoKE54ORF14115P |
14145 | helix-turn-helix domain-containing protein | |||
20120 | endoribonuclease SymE | |||
20125 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoKE54ORF20135P |
20130 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoKE54ORF20135P |
20135 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoKE54ORF20135P |
20140 | restriction endonuclease | |||
21945 | ash family protein | |||
21950 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoKE54ORF21955P |
21955 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoKE54ORF21955P |
21960 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoKE54ORF21955P |
21965 | type IV toxin-antitoxin system AbiEi family | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1845 | TrmB family transcriptional regulator | |||
1850 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoKE54ORF1850P |
1865 | DUF3927 family protein | |||
5450 | drug/metabolite exporter YedA | |||
5455 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoKE54DcmP |
5460 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoKE54DcmP |
5465 | phosphohydrolase | |||
12960 | DNA-binding transcriptional regulator Fis | |||
12965 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoKE54ORF12965P |
12970 | DUF2556 family protein | |||
13560 | ribulose-phosphate 3-epimerase | |||
13565 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoKE54DamP |
13570 | cell division protein DamX | |||
18410 | conjugal transfer protein TraG N-terminal | |||
18415 | M | M.EcosS3ORF15775P (100% identity) | M.EcoKE54ORF18415P | |
18420 | R | EcosS3ORF15775P (100% identity) | EcoKE54ORF18415P | |
18425 | response regulator receiver domain | |||
19750 | helix-turn-helix domain-containing protein | |||
19755 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoKE54ORF19755P |
19760 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoKE54ORF19755P |
19765 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoKE54ORF19755P |
19770 | McrC family protein | |||
25705 | 71 aa hypothetical protein | |||
25710 | M | M.KpnYN1ORFGP (89% identity) | M.EcoKE54ORF25710P | |
25715 | helix-turn-helix transcriptional regulator | |||
plasmid unnamed1 | ||||
450 | 73 aa hypothetical protein | |||
455 | M | M.UbapRSB107ORFAP (97% identity) | M.EcoKE54ORF455P | |
460 | 103 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
19765 | Alw26I/Eco31I/Esp3I family type II restriction | |||
19770 | R | EcosS9McrCP (100% identity) | EcoKE54McrCP | |
19775 | R | EcosS9McrBP (99% identity) | EcoKE54McrBP | |
19780 | IS3-like element ISEc52 family transposase |