Helicobacter pylori 51N |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Helicobacter pylori 51N RM systems
Ref: Choi,J.G. et al. unpublished
REBASE ref # 37993
Complete sequence: 1,589,944 bp
GenBank #: CP140483
REBASE acronym: Hpy51N
Org_num: 73599
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | S | S.Hpy51ORF427P (100% identity) | CCANNNNNNTC | S.Hpy51NORFB1P |
| ??? | M | M.Hpy51ORF427P (100% identity) | CCANNNNNNTC | M.Hpy51NORFB1P |
| ??? | R | Hpy51ORF427P (100% identity) | CCANNNNNNTC | Hpy51NORFB1P |
| ??? | M | M.Hpy51ORF480P (92% identity) | CTANNNNNNNNTGT | M.Hpy51NORFC1P |
| ??? | S | S.Hpy51ORF480P (100% identity) | CTANNNNNNNNTGT | S.Hpy51NORFC1P |
| ??? | R | Hpyfe107ORF5130P (97% identity) | CTANNNNNNNNTGT | Hpy51NORFC1P |
| ??? | S | S.Hpy51ORF1386P (98% identity) | S.Hpy51NORFVP | |
| ??? | M | M.Hpy51ORF1386P (100% identity) | M.Hpy51NORFVP | |
| ??? | R | Hpy51ORF1386P (100% identity) | Hpy51NORFVP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M1.HpyLI13III (98% identity) | GAAGA | M1.Hpy51NORFFP |
| ??? | M | M2.HpyAR8ORF205P (100% identity) | GAAGA | M2.Hpy51NORFFP |
| ??? | R | Hpy51ORF34P (100% identity) | GAAGA | Hpy51NORFFP |
| ??? | RM | Hpy51ORF48P (95% identity) | Hpy51NORFUP | |
| ??? | M | M.Hpy51ORF49P (100% identity) | GANTC | M.Hpy51NORFIP |
| ??? | R | Hpy51ORF49P (100% identity) | GANTC | Hpy51NORFIP |
| ??? | M | M1.Hpy51ORF59P (100% identity) | CCTC | M1.Hpy51NORFBP |
| ??? | M | M2.HpyOK310ORFLP (100% identity) | CCTC | M2.Hpy51NORFBP |
| ??? | R | HpyAR10IVP (96% identity) | CCTC | Hpy51NORFBP |
| ??? | M | M.HpyOK316ORFRP (100% identity) | GTSAC | M.Hpy51NORFKP |
| ??? | R | Hpy51I (100% identity) | GTSAC | Hpy51NORFKP |
| ??? | R | Hpy51ORF96P (49% identity) | GATC | Hpy51NORFRP |
| ??? | M | Hpy51ORF96P (50% identity) | GATC | M.Hpy51NORFRP |
| ??? | R | Hpy51ORF176P (100% identity) | Hpy51NORFDP | |
| ??? | M | M.HpyJ017IV (98% identity) | TCGA | M.Hpy51NORFGP |
| ??? | R | Hpy51ORF261P (100% identity) | CCGG | Hpy51NORFSP |
| ??? | M | M.Hpyfe97ORF6090P (100% identity) | CCGG | M.Hpy51NORFSP |
| ??? | M | M.Hpy51ORF442P (100% identity) | ATTAAT | M.Hpy51NORFA1P |
| ??? | M | M.Hpy51ORF445P (100% identity) | ACNGT | M.Hpy51NORFPP |
| ??? | R | Hpyfe88ORF4775P (100% identity) | ACNGT | Hpy51NORFPP |
| ??? | M | M.Hpy51ORF447P (98% identity) | ACGT | M.Hpy51NORFJP |
| ??? | R | Hpy51ORF447P (80% identity) | ACGT | Hpy51NORFJP |
| ??? | R | Hpyfe33ORF3810P (100% identity) | CCNNGG | Hpy51NORFEP |
| ??? | M | M.Hpyfe56ORF3730P (100% identity) | CCNNGG | M.Hpy51NORFEP |
| ??? | RM | Hpyfe60ORF3860P (66% identity) | Hpy51NORFD1P | |
| ??? | R | HpyM5CORFYP (95% identity) | GTAC | Hpy51NORFLP |
| ??? | M | M.Hpy51ORF814P (99% identity) | GTAC | M.Hpy51NORFLP |
| ??? | R | Hpy51ORF850P (100% identity) | GTNNAC | Hpy51NORFHP |
| ??? | M | M.Hpy51ORF850P (98% identity) | GTNNAC | M.Hpy51NORFHP |
| ??? | M | M.Hpyfe88ORF2055P (100% identity) | TCNNGA | M.Hpy51NORFNP |
| ??? | R | Hpy51ORF987P (100% identity) | TCNNGA | Hpy51NORFNP |
| ??? | M | M.Hpy51ORF1020P (98% identity) | GCGC | M.Hpy51NORFOP |
| ??? | M | M.Hpy51ORF1104P (100% identity) | CATG | M.Hpy51NORFMP |
| ??? | R | Hpy51ORF1104AP (100% identity) | CATG | Hpy51NORFMP |
| ??? | S | S.HpyOki128ORF6635P (68% identity) | S.Hpy51NORFZP | |
| ??? | RM | Hpy05ORFBP (98% identity) | CYANNNNNNTGA | Hpy51NORFZP |
| ??? | RM | Hpy51ORF1368P (100% identity) | Hpy51NORFTP | |
| ??? | M | M.Hpy51ORF1404P (100% identity) | TGCA | M.Hpy51NORFQP |
| ??? | R | HpyK042IIP (100% identity) | TGCA | Hpy51NORFQP |
| ??? | M | M.HpyK117ORF7445P (100% identity) | M.Hpy51NORFCP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | Hpy51ORF33P (100% identity) | Hpy51NORFWP | |
| ??? | M | M.Hpy458ORFMP (95% identity) | M.Hpy51NORFWP | |
| ??? | M | M.Hpy51ORF1256P (100% identity) | M.Hpy51NORFXP | |
| ??? | R | HpyP87ORFPP (93% identity) | Hpy51NORFXP | |
| ??? | R | Hpy51ORF1374AP (100% identity) | Hpy51NORFYP | |
| ??? | M | M.HpyAR8ORF7260P (98% identity) | M.Hpy51NORFYP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyMA15GmrSD2P (94% identity) | Hpy51NGmrSD2P | |
| ??? | R | Hpy51GmrSDP (100% identity) | Hpy51NGmrSDP | |