Escherichia coli Nord58 |
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Putative Escherichia coli Nord58 RM systems
Ref: Braun,S.D. unpublished
REBASE ref # 33101
| Sequence length: | GenBank #: | |
| Chromosome: | 5,378,037 bp | CP139846 |
| plasmid pNORD58_2: | 96,069 bp | CP139843 |
| plasmid pNORD58_3: | 83,987 bp | CP139841 |
| plasmid pNORD58_4: | 24,120 bp | CP139844 |
| plasmid pNORD58_5: | 74,362 bp | CP139845 |
REBASE acronym: Ecod58
Org_num: 73588
All begin U0535_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22625 | endoribonuclease SymE | |||
| 22630 | R | Ecost88ORF20845P (99% identity) | GGYANNNNNGTNG | Ecod58ORF22640P |
| 22635 | S | S.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | S.Ecod58ORF22640P |
| 22640 | M | M.Ecost88ORF20845P (100% identity) | GGYANNNNNGTNG | M.Ecod58ORF22640P |
| 22645 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7580 | 39 aa hypothetical protein | |||
| 7600 | M | M.EcoS4ORF2925P (100% identity) | A | M.Ecod58ORF7600P |
| 7605 | TrmB family transcriptional regulator | |||
| 8200 | drug/metabolite exporter YedA | |||
| 8205 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Ecod58DcmP |
| 8210 | M | M.Ecou021DcmP (100% identity) | CCWGG | M.Ecod58DcmP |
| 8215 | phosphohydrolase | |||
| 11610 | PerC family transcriptional regulator | |||
| 11615 | M | M.Eco1246ORF16335P (100% identity) | M.Ecod58ORF11615P | |
| 11620 | DUF1382 family protein | |||
| 16165 | DNA-binding transcriptional regulator Fis | |||
| 16170 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Ecod58ORF16170P |
| 16175 | DUF2556 family protein | |||
| 16700 | ribulose-phosphate 3-epimerase | |||
| 16705 | M | M.EcoEC0002DamP (99% identity) | GATC | M.Ecod58DamP |
| 16710 | cell division protein DamX | |||
| 28690 | TrmB family transcriptional regulator | |||
| 28695 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Ecod58ORF28695P |
| 28715 | 39 aa hypothetical protein | |||
| plasmid pNORD58_2 | ||||
| 1595 | recombination-associated protein RdgC | |||
| 1600 | M | M.Sen94620ORF28085P (100% identity) | M.Ecod58ORF1600P | |
| 1615 | SPFH domain-containing protein | |||
| plasmid pNORD58_3 | ||||
| 410 | 73 aa hypothetical protein | |||
| 415 | M | M.Ssp14523ORF22990P (100% identity) | M.Ecod58ORF415P | |
| 420 | 103 aa hypothetical protein | |||
| plasmid pNORD58_4 | ||||
| 1985 | 57 aa hypothetical protein | |||
| 1990 | R | Pae326ORF27730P (100% identity) | Ecod58ORF1995P | |
| 1995 | M | M.Easm20ORF23170P (100% identity) | M.Ecod58ORF1995P | |
| 2000 | recombinase family protein | |||
| plasmid pNORD58_5 | ||||
| 2420 | 73 aa hypothetical protein | |||
| 2425 | M | M.Sen1357ORF24335P (100% identity) | M.Ecod58ORF2425P | |
| 2430 | 103 aa hypothetical protein | |||