Escherichia coli FRIK1989 |
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Putative Escherichia coli FRIK1989 RM systems
Ref: Peroutka-Bigus,N. et al. unpublished
REBASE ref # 37890
Complete sequence: 5,603,852 bp
GenBank #: CP111101
REBASE acronym: Eco989
Org_num: 73104
All begin ORM95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17575 | DUF262 domain-containing protein | |||
| 17580 | R | Ecos1613ORF27060P (100% identity) | CACNNNNNNNCTGG | Eco989ORF17585P |
| 17585 | M | M.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | M.Eco989ORF17585P |
| 17590 | S | S.EcosPA8ORF17615P (100% identity) | CACNNNNNNNCTGG | S.Eco989ORF17585P |
| 17595 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2820 | recombination protein NinB | |||
| 2825 | M | M.Eph2851ORFAP (100% identity) | GATC | M.Eco989ORF2825P |
| 2830 | NinE family protein | |||
| 3645 | phosphohydrolase | |||
| 3650 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco989DcmP |
| 3655 | V | V.EcosPA8DcmP (100% identity) | CCWGG | V.Eco989DcmP |
| 3660 | drug/metabolite exporter YedA | |||
| 7405 | DUF1737 domain-containing protein | |||
| 7415 | M | M.EcoTWORF1742P (99% identity) | M.Eco989ORF7415P | |
| 7420 | TrmB family transcriptional regulator | |||
| 8610 | DUF1737 domain-containing protein | |||
| 8625 | M | M.EcosPA8ORF27255P (100% identity) | M.Eco989ORF8625P | |
| 8630 | TrmB family transcriptional regulator | |||
| 15825 | LexA family transcriptional regulator | |||
| 15830 | M | M.EcoZ1836ORF22690P (100% identity) | GATC | M.Eco989ORF15830P |
| 15835 | PerC family transcriptional regulator | |||
| 17810 | RM | EcosPA8ORF17390P (100% identity) | GAAABCC | Eco989ORF17810P |
| 17815 | DEAD/DEAH box helicase | |||
| 17860 | N-acetylneuraminic acid mutarotase | |||
| 17865 | R | Ecos1613ORF26795P (100% identity) | Eco989ORF17865P | |
| 17870 | transposase | |||
| 19115 | IS3-like element IS1203 family transposase | |||
| 19120 | M | M.EcosPA8ORF16100P (100% identity) | M.Eco989ORF19120P | |
| 19125 | 65 aa hypothetical protein | |||
| 23085 | cell division protein DamX | |||
| 23090 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco989DamP |
| 23095 | ribulose-phosphate 3-epimerase | |||
| 23600 | DUF2556 family protein | |||
| 23605 | M | M.EcosPA8ORF11510P (99% identity) | ATGCAT | M.Eco989ORF23605P |
| 23610 | DNA-binding transcriptional regulator Fis | |||
| 28315 | DUF1382 family protein | |||
| 28320 | M | M.EspP079ORF2847P (100% identity) | GATC | M.Eco989ORF28320P |
| 28325 | regulator | |||
| 28445 | Rha family transcriptional regulator | |||
| 28450 | R | Sso1099IP (100% identity) | CTGCAG | Eco989ORF28455P |
| 28455 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco989ORF28455P |
| 28460 | LexA family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17595 | endoribonuclease SymE | |||
| 17600 | R | EcosPA8GmrSDP (55% identity) | Eco989GmrDP | |
| 17605 | R | Ecos1613GmrSP (100% identity) | Eco989GmrSP | |
| 17610 | cytoplasmic protein | |||