Escherichia coli 2017.18.02CC |
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Putative Escherichia coli 2017.18.02CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
Complete sequence: 4,798,073 bp
GenBank #: AP027844
REBASE acronym: Eco802CC
Org_num: 72602
All begin VEE62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 37970 | restriction endonuclease | |||
| 37980 | R | Ecos671ORFCP (99% identity) | CATNNNNNNCTCC | Eco802CCORF37990P |
| 37990 | M | M.SflFF12ORF17265P (100% identity) | CATNNNNNNCTCC | M.Eco802CCORF37990P |
| 38000 | S | S.SflFF12ORF17265P (100% identity) | CATNNNNNNCTCC | S.Eco802CCORF37990P |
| 38010 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3720 | cell division protein DamX | |||
| 3730 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco802CCDamP |
| 3740 | ribulose-phosphate 3-epimerase | |||
| 4740 | acrEF/envCD operon transcriptional regulator | |||
| 4750 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco802CCORF4750P |
| 4760 | DNA-binding protein Fis | |||
| 12590 | serine/threonine protein phosphatase | |||
| 12600 | M | M.EcoF719ORF12920P (100% identity) | M.Eco802CCORF12600P | |
| 12610 | transcriptional activator | |||
| 18050 | 142 aa hypothetical protein | |||
| 18060 | M | M.SflN107DcmP (100% identity) | CCWGG | M.Eco802CCDcmP |
| 18070 | V | V.SflN107DcmP (100% identity) | V.Eco802CCDcmP | |
| 18080 | inner membrane transporter YedA | |||
| 31530 | protein ninX | |||
| ??? | M | M.EcoXH990ORF20715P (100% identity) | GATC | M.Eco802CCORF31540P |
| 31560 | protein ninB | |||
| 37520 | phage holin, lambda family protein | |||
| 37530 | M | M.SflLIN17ORF17405P (100% identity) | M.Eco802CCORF37530P | |
| 37540 | 67 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 37960 | GTP-binding protein YjiA | |||
| 37970 | R | Ssp28760MrrP (99% identity) | Eco802CCMrrP | |
| 37980 | type I restriction-modification system | |||