Escherichia coli 2017.10.01CC |
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Putative Escherichia coli 2017.10.01CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,665,852 bp | AP027800 |
| plasmid p2017.10.01CC_3: | 9,396 bp | AP027803 |
REBASE acronym: Eco001CC
Org_num: 72596
All begin VEE56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17700 | 388 aa hypothetical protein | |||
| 17710 | M | M.Eko70ORF13605P (99% identity) | M.Eco001CCORF17710P | |
| 17720 | S | S.Eco34C12ORF11440P (65% identity) | S.Eco001CCORF17710P | |
| 17730 | 227 aa hypothetical protein | |||
| 17740 | R | SflFF17ORF9165P (99% identity) | Eco001CCORF17710P | |
| 17750 | metal-dependent hydrolase | |||
| 37680 | 119 aa hypothetical protein | |||
| 37690 | R | SspS13ORF3945P (100% identity) | Eco001CCORF37700P | |
| 37700 | M | M.SflTORF4636P (98% identity) | M.Eco001CCORF37700P | |
| 37710 | S | S.SspS13ORF3945P (42% identity) | S1.Eco001CCORF37700P | |
| 37720 | IS5 family transposase | |||
| 37730 | S | S.SspS13ORF3945P (51% identity) | S2.Eco001CCORF37700P | |
| 37740 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3310 | cell division protein DamX | |||
| 3320 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco001CCDamP |
| 3330 | ribulose-phosphate 3-epimerase | |||
| 4470 | acrEF/envCD operon repressor | |||
| 4480 | M | M.EcoCP61ORF2040P (100% identity) | ATGCAT | M.Eco001CCORF4480P |
| 4490 | DNA-binding protein Fis | |||
| 12920 | protein ninB | |||
| 12930 | M | M.EcoLR641ORF13390P (98% identity) | GATC | M.Eco001CCORF12930P |
| 12940 | DNA-binding protein | |||
| 17110 | phosphohydrolase | |||
| 17120 | M | M.EcoCP61DcmP (100% identity) | CCWGG | M.Eco001CCDcmP |
| 17130 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco001CCDcmP |
| 17140 | multidrug transporter | |||
| 37090 | prophage lysis protein S homolog EssD | |||
| 37100 | M | M.Sso63633ORF22290P (100% identity) | M.Eco001CCORF37100P | |
| 37110 | 67 aa hypothetical protein | |||
| 37170 | LexA family transcriptional regulator | |||
| 37180 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco001CCORF37180P |
| 37190 | 162 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p2017.10.01CC_3 | ||||
| 45350 | 149 aa hypothetical protein | |||
| 45360 | M | M.SspS13ORF650P (100% identity) | M.Eco001CCORF45360P | |
| 45370 | R | SspS13ORF650P (100% identity) | Eco001CCORF45360P | |
| 45380 | 194 aa hypothetical protein | |||