Escherichia coli 2017.04.02CC |
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Putative Escherichia coli 2017.04.02CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
Complete sequence: 4,847,646 bp
GenBank #: AP027788
REBASE acronym: Eco402CC
Org_num: 72594
All begin VEE54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 26020 | 227 aa hypothetical protein | |||
| 26030 | S | S.EcoYPE12ORF11395P (100% identity) | S.Eco402CCORF26040P | |
| 26040 | M | M.EcoYPE12ORF11395P (100% identity) | M.Eco402CCORF26040P | |
| 26050 | 388 aa hypothetical protein | |||
| 39320 | 119 aa hypothetical protein | |||
| 39330 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco402CCORF39340P |
| 39340 | M | M.SflTORF4636P (98% identity) | CCANNNNNNNNNTTGG | M.Eco402CCORF39340P |
| 39350 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco402CCORF39340P |
| 39360 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4010 | cell division protein DamX | |||
| 4020 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco402CCDamP |
| 4030 | ribulose-phosphate 3-epimerase | |||
| 4990 | acrEF/envCD operon transcriptional regulator | |||
| 5000 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco402CCORF5000P |
| 5010 | DNA-binding protein Fis | |||
| 15300 | 75 aa hypothetical protein | |||
| 15310 | M | M.Kpn80148ORFEP (100% identity) | GATC | M.Eco402CCORF15310P |
| 15320 | replication endonuclease from | |||
| 26680 | multidrug transporter | |||
| 26690 | V | V.EcosEC71DcmP (100% identity) | V.Eco402CCDcmP | |
| 26700 | M | M.EcosEC71DcmP (100% identity) | CCWGG | M.Eco402CCDcmP |
| 26710 | phosphohydrolase | |||
| 39700 | 9-O-acetyl-N-acetylneuraminic acid | |||
| ??? | R | SflN101ORF11875P (100% identity) | Eco402CCORF39710P | |
| 39730 | 691 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 39360 | endoribonuclease SymE | |||
| ??? | R | SflN101GmrSP (100% identity) | Eco402CCGmrSP | |
| 39390 | 49 aa hypothetical protein | |||
| 39720 | 187 aa hypothetical protein | |||
| 39730 | R | SflN101McrBP (100% identity) | Eco402CCMcrBP | |
| 39740 | R | SflN101McrCP (100% identity) | Eco402CCMcrCP | |
| 39750 | 164 aa hypothetical protein | |||