Escherichia coli 2017-02-1CC |
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Putative Escherichia coli 2017-02-1CC RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
| Sequence length: | GenBank #: | |
| Chromosome: | 4,650,327 bp | AP027759 |
| plasmid p2017-02-1CC_1: | 231,841 bp | AP027760 |
| plasmid p2017-02-1CC_2: | 183,352 bp | AP027761 |
REBASE acronym: Eco21CC
Org_num: 72586
All begin VEE73_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| plasmid p2017-02-1CC_2 | ||||
| 46970 | 73 aa hypothetical protein | |||
| 46980 | M | M.Ecos2020ORFGP (100% identity) | M.Eco21CCORF46980P | |
| 46990 | S | S2.EcoXD35ORF2380P (63% identity) | S.Eco21CCORF46980P | |
| 47000 | R | EcoRA119ORF26420P (99% identity) | Eco21CCORF46980P | |
| 47010 | 168 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3150 | cell division protein DamX | |||
| ??? | M | M.SspPIBDamP (100% identity) | GATC | M.Eco21CCDamP |
| 3170 | ribulose-phosphate 3-epimerase | |||
| 4330 | acrEF/envCD operon repressor | |||
| 4340 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco21CCORF4340P |
| 4350 | DNA-binding protein Fis | |||
| 7710 | ATP-dependent helicase | |||
| 7720 | RM | EcoPK8566ORF18280P (100% identity) | Eco21CCORF7720P | |
| 17320 | 142 aa hypothetical protein | |||
| 17330 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco21CCDcmP |
| 17340 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco21CCDcmP |
| 17350 | inner membrane transporter YedA | |||
| 28340 | replication endonuclease from | |||
| 28350 | M | M.SflP099ORF15630P (100% identity) | GATC | M.Eco21CCORF28350P |
| 28360 | 75 aa hypothetical protein | |||
| plasmid p2017-02-1CC_1 | ||||
| 44390 | 55 aa hypothetical protein | |||
| ??? | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco21CCORF44400P |
| 44420 | nuclease | |||
| 45240 | 108 aa hypothetical protein | |||
| 45250 | M | M.YpsF1ORFBP (100% identity) | M.Eco21CCORF45250P | |
| 45260 | 202 aa hypothetical protein | |||
| 45480 | DNA-binding protein | |||
| 45490 | M | M.YpsF1ORFDP (84% identity) | M.Eco21CCORF45490P | |
| 45500 | 85 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 24860 | 50 aa hypothetical protein | |||
| 24870 | R | EmaE2C08McrCP (98% identity) | Eco21CCMcrCP | |
| 24880 | R | EcoUKMcrBP (100% identity) | Eco21CCMcrBP | |
| 24890 | 129 aa hypothetical protein | |||