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Putative Escherichia coli LR-41 RM systems
Ref: Hoang,H.T.T. et al. unpublished
REBASE ref # 37785
Complete sequence: 4,637,241 bp
GenBank #: AP027528
REBASE acronym: EcoLR41
Org_num: 72632
All begin VEE32_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
36060 | endoribonuclease SymE | |||
36070 | S | S.Ecou015ORF19665P (46% identity) | S2.EcoLR41ORF36090P | |
36080 | S | S.Efe35473ORFDP (42% identity) | S1.EcoLR41ORF36090P | |
36090 | M | M.EcoPSJ12ORF22640P (99% identity) | M.EcoLR41ORF36090P | |
36100 | R | Ecou015ORF19665P (100% identity) | EcoLR41ORF36090P | |
36110 | 139 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
25590 | DNA-binding protein Fis | |||
25600 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoLR41ORF25600P |
25610 | acrEF/envCD operon repressor | |||
26820 | ribulose-phosphate 3-epimerase | |||
26830 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoLR41DamP |
26840 | cell division protein DamX | |||
39420 | 162 aa hypothetical protein | |||
39430 | M | M.EcoT761ORF20590P (99% identity) | GATC | M.EcoLR41ORF39430P |
39440 | LexA family transcriptional regulator | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
11520 | 221 aa hypothetical protein | |||
11530 | R | Eco6E9ORF10950P (99% identity) | EcoLR41ORF11540P | |
11540 | M | M.Eco6E9ORF10950P (100% identity) | M.EcoLR41ORF11540P | |
11550 | DNA helicase II | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
36040 | 49 aa hypothetical protein | |||
36050 | R | Ecou015GmrSDP (100% identity) | EcoLR41GmrSDP | |
36060 | endoribonuclease SymE | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
16730 | 127 aa hypothetical protein | |||
16740 | M | M.SflN97ORF8425P (100% identity) | GATC | M.EcoLR41ORF16740P |
16750 | protein ninB |