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Putative Citrobacter freundii OIPH-N330 RM systems
Ref: Umeda,K. et al. unpublished
REBASE ref # 37778
Sequence length: | GenBank #: | |
Chromosome: | 5,501,913 bp | AP028314 |
plasmid pN330-1: | 345,780 bp | AP028315 |
plasmid pN330-2: | 178,823 bp | AP028316 |
REBASE acronym: Cfr330
Org_num: 72534
All begin OIPHN330_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
45970 | 388 aa hypothetical protein | |||
45980 | R | CfrE51ORF21070P (100% identity) | Cfr330ORF45990P | |
45990 | M | M.Cfr354ORF46460P (100% identity) | M.Cfr330ORF45990P | |
46000 | S | S.Cfr56415ORF5180P (100% identity) | S.Cfr330ORF45990P | |
46010 | endoribonuclease SymE | |||
46380 | 1208 aa hypothetical protein | |||
46390 | M | M.CfrE51ORF21275P (100% identity) | M.Cfr330ORF46390P | |
46400 | S | S.Cfr56415ORF4990P (100% identity) | GRTAYNNNNNGTTY | S1.Cfr330ORF46390P |
46410 | 477 aa hypothetical protein | |||
46420 | 676 aa hypothetical protein | |||
46430 | R | Cfr354ORF46860P (100% identity) | Cfr330ORF46390P | |
46440 | S | S2.Cfr354ORF46860P (100% identity) | S2.Cfr330ORF46390P | |
46450 | 438 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3960 | cell division protein DamX | |||
3970 | M | M.Eco5172DamP (100% identity) | GATC | M.Cfr330DamP |
3980 | ribulose-phosphate 3-epimerase | |||
4970 | acrEF/envCD operon transcriptional regulator | |||
4980 | M | M.CspLUTT5ORF2195P (100% identity) | ATGCAT | M.Cfr330ORF4980P |
4990 | integrase | |||
12770 | 75 aa hypothetical protein | |||
12780 | M | M.Cfr354ORF12770P (100% identity) | M.Cfr330ORF12780P | |
12790 | replication endonuclease | |||
16450 | bacteriophage lambda NinG | |||
16460 | M | M.Cfr354ORF16440P (100% identity) | M.Cfr330ORF16460P | |
16470 | antitermination protein | |||
21490 | phosphohydrolase | |||
21500 | M | M.CfrLORF9975P (97% identity) | CCWGG | M.Cfr330ORF21500P |
21510 | V | V.CfrMH15ORF11700P (100% identity) | V.Cfr330ORF21500P | |
21520 | drug/metabolite exporter YedA | |||
22050 | 182 aa hypothetical protein | |||
22060 | M | M1.Cfr354ORF21960P (100% identity) | M1.Cfr330ORF22060P | |
22070 | 68 aa hypothetical protein | |||
22080 | 57 aa hypothetical protein | |||
22090 | M | M.CfrCF04ORFGP (100% identity) | M2.Cfr330ORF22060P | |
22100 | 879 aa hypothetical protein | |||
23040 | 148 aa hypothetical protein | |||
23050 | M | M.Cfr354ORF22960P (100% identity) | M.Cfr330ORF23050P | |
23060 | 72 aa hypothetical protein | |||
27620 | 63 aa hypothetical protein | |||
27630 | M | M.Cfr354ORF27550P (100% identity) | M.Cfr330ORF27630P | |
27640 | 187 aa hypothetical protein | |||
29750 | 335 aa hypothetical protein | |||
29760 | M | M.CfrE51ORF13210P (100% identity) | M.Cfr330ORF29760P | |
29770 | 93 aa hypothetical protein | |||
34350 | 112 aa hypothetical protein | |||
34360 | M | M1.Cfr354ORF34790P (100% identity) | M1.Cfr330ORF34360P | |
34370 | 90 aa hypothetical protein | |||
34380 | M | M2.Cfr354ORF34790P (100% identity) | M2.Cfr330ORF34360P | |
34390 | 94 aa hypothetical protein | |||
42350 | DUF1317 domain-containing protein | |||
42360 | M | M.Cfr354ORF42800P (100% identity) | M.Cfr330ORF42360P | |
42370 | bacteriophage protein | |||
46310 | 211 aa hypothetical protein | |||
46320 | R | CfrE51ORF21250P (100% identity) | Cfr330ORF46320P | |
46330 | 75 aa hypothetical protein | |||
49220 | 72 aa hypothetical protein | |||
49230 | M | M.Cfr354ORF49710P (100% identity) | M.Cfr330ORF49230P | |
49240 | 147 aa hypothetical protein | |||
51140 | portal vertex protein | |||
51150 | M | M.Cfr354ORF51640P (100% identity) | M.Cfr330ORF51150P | |
51160 | phage replication protein | |||
51160 | phage replication protein | |||
??? | M | M.Cfr354ORF51660P (100% identity) | M.Cfr330ORF51170P | |
51180 | 106 aa hypothetical protein | |||
plasmid pN330-1 | ||||
55170 | 55 aa hypothetical protein | |||
55180 | M | M.Cfr354ORF55670P (100% identity) | M.Cfr330ORF55180P | |
55190 | nuclease | |||
56140 | 102 aa hypothetical protein | |||
56150 | M | M.SenZC055ORF24890P (100% identity) | M.Cfr330ORF56150P | |
56160 | 203 aa hypothetical protein | |||
56940 | DNA-binding protein | |||
56950 | M | M1.PspNIH2ORF20995P (100% identity) | M.Cfr330ORF56950P | |
56960 | 217 aa hypothetical protein | |||
plasmid pN330-2 | ||||
57400 | 120 aa hypothetical protein | |||
57410 | M | M.KquSNI47ORF52720P (100% identity) | M.Cfr330ORF57410P | |
57420 | 149 aa hypothetical protein | |||
58140 | 100 aa hypothetical protein | |||
58150 | M | M.Cfr354ORF58660P (100% identity) | M.Cfr330ORF58150P | |
58160 | 99 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
32440 | 462 aa hypothetical protein | |||
32450 | M | M.Cfr354ORF32890P (100% identity) | GTCAGC | M.Cfr330ORF32450P |
32460 | R | Cfr354ORF32890P (100% identity) | GTCAGC | Cfr330ORF32450P |
32470 | prepilin | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
45960 | 100 aa hypothetical protein | |||
45970 | R | Cfr354MrrP (100% identity) | Cfr330MrrP | |
45980 | DEAD/DEAH box helicase | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
51180 | 106 aa hypothetical protein | |||
51190 | M | M.Cfr354ORF51680P (100% identity) | M.Cfr330ORF51190P | |
51200 | 70 aa hypothetical protein |