Xanthomonas arboricola isolate Xanthomonas sp. CPBF 554 |
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Putative Xanthomonas arboricola isolate Xanthomonas sp. CPBF 554 RM systems
Ref: Teixeira,M. unpublished
REBASE ref # 30900
Complete sequence: 5,299,179 bp
GenBank #: LR962896
REBASE acronym: Xar554
Org_num: 72976
All begin X12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1224 | M48 family metallopeptidase | |||
| 1225 | R | Xca33085ORF12390P (99% identity) | Xar554ORF1229P | |
| 1226 | S | S.Xca33085ORF12390P (100% identity) | S2.Xar554ORF1229P | |
| ??? | S | S2.Xar1514ORF3163P (45% identity) | S1.Xar554ORF1229P | |
| 1229 | M | M.Xca33086ORF8570P (100% identity) | M.Xar554ORF1229P | |
| 1230 | restriction endonuclease subunit S | |||
| 3302 | 98 aa hypothetical protein | |||
| 3303 | R | Xca33086ORF18150P (100% identity) | Xar554ORF3309P | |
| 3304 | 224 aa hypothetical protein | |||
| 3305 | abortive infection family protein | |||
| 3306 | S | S.Xca33086ORF18150P (100% identity) | S2.Xar554ORF3309P | |
| 3307 | S | S1.Xari3ORF3215P (100% identity) | S1.Xar554ORF3309P | |
| 3308 | nucleotidyltransferase substrate binding | |||
| 3309 | M | M.Xca33086ORF18150P (95% identity) | M2.Xar554ORF3309P | |
| 3310 | IS5 family transposase | |||
| 3311 | M | M.Xari3ORF3215P (25% identity) | M1.Xar554ORF3309P | |
| 3313 | type II toxin-antitoxin system RelE/ParE family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 543 | AAA family ATPase | |||
| 544 | R | Xar417ORF16175P (100% identity) | GTCGAC | Xar554ORF545P |
| 545 | M | M.Xar417ORF16175P (100% identity) | GTCGAC | M.Xar554ORF545P |
| 546 | 95 aa hypothetical protein | |||
| 1125 | 90 aa hypothetical protein | |||
| 1126 | M | M.XarCORFLP (92% identity) | M.Xar554ORF1126P | |
| 1128 | phage portal protein | |||
| 1577 | 53 aa hypothetical protein | |||
| 1578 | M | M2.Xca33085ORF9685P (100% identity) | M1.Xar554ORF1578P | |
| 1579 | M | M1.Xca33085ORF9685P (100% identity) | M2.Xar554ORF1578P | |
| 1580 | 51 aa hypothetical protein | |||
| 1808 | transcriptional regulator | |||
| 1809 | M | M.Xar1567ORF2325P (99% identity) | M.Xar554ORF1809P | |
| 1810 | V | V.Xar2499ORF21055P (100% identity) | V.Xar554ORF1809P | |
| 1811 | 397 aa hypothetical protein | |||
| 2321 | DNA topoisomerase III | |||
| 2322 | M | M.Xar417ORF710P (100% identity) | M.Xar554ORF2322P | |
| 2323 | 78 aa hypothetical protein | |||
| 2806 | GspH/FimT family pseudopilin | |||
| 2807 | R | Xca33085ORF3130P (100% identity) | Xar554ORF2808P | |
| 2808 | M | M1.Xari3ORF2718P (100% identity) | M1.Xar554ORF2808P | |
| 2809 | M | M2.Xca33086ORF3820P (100% identity) | M2.Xar554ORF2808P | |
| 2811 | phage portal protein | |||
| 2941 | 266 aa hypothetical protein | |||
| 2942 | M | M.Xca33085ORF6571P (100% identity) | GATC | M.Xar554ORF2942P |
| 2943 | site-specific integrase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 65 | IS4-like element ISXac1 family transposase | |||
| 66 | R | Xari3Mrr2P (100% identity) | Xar554Mrr2P | |
| 67 | 139 aa hypothetical protein | |||
| 1810 | very short patch repair endonuclease | |||
| 1811 | R | Xar417McrCP (95% identity) | Xar554McrCP | |
| ??? | R | Xar1317McrBP (100% identity) | Xar554McrBP | |
| 1813 | site-specific integrase | |||
| 3310 | IS5 family transposase | |||
| 3312 | R | Xca33086MrrP (100% identity) | Xar554MrrP | |
| 3313 | type II toxin-antitoxin system RelE/ParE family | |||