Vibrio cholerae TP |
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Putative Vibrio cholerae TP RM systems
Ref: Otto,S.B. et al. unpublished
REBASE ref # 37850
Complete sequence: 2,939,878 bp
GenBank #: CP137095
REBASE acronym: VchP
Org_num: 72961
All begin R4536_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4550 | ribulose-phosphate 3-epimerase | |||
| 4555 | M | M.VspNIH41DamP (100% identity) | GATC | M.VchPDamP |
| 4560 | AAA family ATPase | |||
| 9540 | 170 aa hypothetical protein | |||
| 9545 | R | VchW7GDptFP (100% identity) | VchPDptFP | |
| 9550 | DNA phosphorothioation-dependent restriction | |||
| 9545 | DNA phosphorothioation-dependent restriction | |||
| 9550 | R | VchW7GDptGP (100% identity) | VchPDptGP | |
| 9555 | DNA phosphorothioation-dependent restriction | |||
| 9550 | DNA phosphorothioation-dependent restriction | |||
| 9555 | R | VchW7GDptHP (99% identity) | VchPDptHP | |
| 9560 | 324 aa hypothetical protein | |||
| 9570 | HNH endonuclease domain-containing protein | |||
| 9575 | M | M.VchW10GDndEP (86% identity) | M.VchPDndEP | |
| ??? | hypothetical protein | |||
| 9575 | DNA sulfur modification protein DndE | |||
| ??? | M | M.Vch5DndDP (98% identity) | M.VchPDndDP | |
| ??? | hypothetical protein | |||
| ??? | hypothetical protein | |||
| ??? | M | M.VchW7GDndCP (99% identity) | M.VchPDndCP | |
| 9605 | DNA sulfur modification protein DndB | |||
| ??? | hypothetical protein | |||
| 9605 | M | M.VchW7GDndBP (100% identity) | M.VchPDndBP | |
| 9610 | aminotransferase class V-fold PLP-dependent | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6330 | replication protein P | |||
| 6335 | M | M.VchTPORF885P (92% identity) | M.VchPORF6335P | |
| 6340 | R | VchTPORF885P (100% identity) | VchPORF6335P | |
| 6345 | 118 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9610 | aminotransferase class V-fold PLP-dependent | |||
| 9615 | R | VchVN152MrrP (99% identity) | VchPMrrP | |
| 9620 | DNA phosphorothioation-associated putative | |||