Escherichia coli isolate S142 |
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Putative Escherichia coli isolate S142 RM systems
Ref: Leclercq,S. unpublished
REBASE ref # 37790
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,663,521 bp | OY754442 |
| plasmid pS142-1: | 119,880 bp | OY754437 |
| plasmid pS142-2: | 87,275 bp | OY754438 |
| plasmid pS142-3: | 47,403 bp | OY754439 |
REBASE acronym: EcosS142
Org_num: 72690
All begin FGAS142_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 17710 | 388 aa hypothetical protein | |||
| 17720 | M | M.EcoH40aORFDP (99% identity) | M.EcosS142ORF17720P | |
| 17730 | S | S.SflLIN17ORF9030P (99% identity) | S.EcosS142ORF17720P | |
| 17740 | UPF0149 family protein YecA | |||
| 17750 | 620 aa hypothetical protein | |||
| 17760 | R | EcoE1441ORF1991P (99% identity) | EcosS142ORF17720P | |
| 17770 | SprT family zinc-dependent metalloprotease | |||
| 37750 | adenine/cytosine-specific restriction | |||
| 37760 | R | EcoPSS10ORF38070P (100% identity) | CACNNNNNNGTTG | EcosS142ORF37770P |
| 37770 | M | M.EcosB2CORFBP (100% identity) | CACNNNNNNGTTG | M.EcosS142ORF37770P |
| 37780 | S | S.EcosB2CORFBP (100% identity) | CACNNNNNNGTTG | S.EcosS142ORF37770P |
| 37790 | endoribonuclease SymE | |||
| plasmid pS142-1 | ||||
| 43550 | 73 aa hypothetical protein | |||
| 43560 | M | M.EcoZ063ORF23860P (100% identity) | M.EcosS142ORF43560P | |
| 43570 | S | S.EcoS1632ORFBP (100% identity) | S.EcosS142ORF43560P | |
| 43580 | R | EcoF719ORF48660P (100% identity) | EcosS142ORF43560P | |
| 43590 | NIF family HAD-type phosphatase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3190 | cell division protein DamX | |||
| 3200 | M | M.SspPIBDamP (100% identity) | GATC | M.EcosS142DamP |
| 3210 | ribulose-phosphate 3-epimerase | |||
| 4400 | DUF2556 family protein | |||
| 4410 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcosS142ORF4410P |
| 4420 | DNA-binding transcriptional regulator Fis | |||
| 17080 | phosphohydrolase | |||
| 17090 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.EcosS142DcmP |
| 17100 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcosS142DcmP |
| 17110 | drug/metabolite exporter YedA | |||
| plasmid pS142-2 | ||||
| 45540 | 73 aa hypothetical protein | |||
| 45550 | M | M.SenS380ORF24445P (100% identity) | M.EcosS142ORF45550P | |
| 45560 | conserved protein of unknown function | |||
| plasmid pS142-3 | ||||
| 45970 | 75 aa hypothetical protein | |||
| 45980 | M | M.EcoRL465ORFJP (100% identity) | M.EcosS142ORF45980P | |
| 45990 | 90 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 37740 | GTPase | |||
| 37750 | R | SenHNK130MrrP (100% identity) | EcosS142MrrP | |
| 37760 | type I restriction-modification system | |||
| 37790 | endoribonuclease SymE | |||
| 37800 | R | EcoLR27GmrSDP (100% identity) | EcosS142GmrSDP | |
| 37810 | 71 aa hypothetical protein | |||