Xylella fastidiosa CFBP8478 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Xylella fastidiosa CFBP8478 RM systems
Ref: Velasco-Amo,M.P. et al. unpublished
REBASE ref # 37744
| Sequence length: | GenBank #: | |
| Chromosome: | 2,628,770 bp | CP135134 |
| plasmid pXF-CFBP8478: | 47,863 bp | CP135135 |
REBASE acronym: Xfa78
Org_num: 72423
All begin RO838_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1200 | M48 family metallopeptidase | |||
| 1205 | R | Xfa3ORF1210P (100% identity) | Xfa78ORF1220P | |
| 1210 | 58 aa hypothetical protein | |||
| 1215 | S | S.Xfa3ORF1210P (100% identity) | S.Xfa78ORF1220P | |
| ??? | M | M.XfaCO33ORF6365P (100% identity) | M.Xfa78ORF1220P | |
| 1240 | 45 aa hypothetical protein | |||
| 11575 | 56 aa hypothetical protein | |||
| 11580 | R | Xfa3ORF11575P (100% identity) | Xfa78ORF11590P | |
| 11585 | S | S.XfaCO33ORF170P (100% identity) | S.Xfa78ORF11590P | |
| 11590 | M | M.XfaCO33ORF170P (100% identity) | M.Xfa78ORF11590P | |
| 11595 | HNH endonuclease family protein | |||
| 11595 | HNH endonuclease family protein | |||
| 11600 | R | XfaCO33ORF145P (100% identity) | Xfa78ORF11615P | |
| 11605 | S | S.XfaCO33ORF145P (100% identity) | S.Xfa78ORF11615P | |
| 11610 | 84 aa hypothetical protein | |||
| 11615 | M | M.XfaCO33ORF145P (100% identity) | M.Xfa78ORF11615P | |
| 11620 | LysE family translocator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3065 | ATP-binding protein | |||
| 3070 | M | M.Xfa3ORF3050P (100% identity) | M.Xfa78ORF3070P | |
| 3080 | R | XfaCO33ORF8725P (100% identity) | GTCGAC | Xfa78ORF3070P |
| 3085 | DUF262 domain-containing protein | |||
| 3430 | zinc finger-like domain-containing protein | |||
| 3435 | M | M.XfaCO33ORF2290P (100% identity) | M.Xfa78ORF3435P | |
| 3440 | lysozyme | |||
| 5640 | lysozyme | |||
| 5645 | M | M.XfaCO33ORF7400P (100% identity) | M.Xfa78ORF5645P | |
| 5650 | zinc finger-like domain-containing protein | |||
| 8480 | 206 aa hypothetical protein | |||
| 8485 | M | M.XfaCO33ORF11535P (100% identity) | TTCGAA | M.Xfa78ORF8485P |
| 8490 | R | XfaCO33ORF11535P (100% identity) | TTCGAA | Xfa78ORF8485P |
| 8495 | 56 aa hypothetical protein | |||
| 8495 | 56 aa hypothetical protein | |||
| 8500 | R | XfaCO33ORF11520P (100% identity) | RGATCY | Xfa78ORF8505P |
| 8505 | M | M.XfaCO33ORF11520P (100% identity) | RGATCY | M.Xfa78ORF8505P |
| 8510 | 67 aa hypothetical protein | |||
| 9365 | DNA primase | |||
| 9370 | R | Xfa3ORF9360P (100% identity) | Xfa78ORF9375P | |
| 9375 | M | M.XfaCO33ORF3840P (63% identity) | M.Xfa78ORF9375BP | |
| 9380 | M | M.XfaY3CORF8660P (30% identity) | M.Xfa78ORF9375AP | |
| 9385 | tryptophan--tRNA ligase | |||
| plasmid pXF-CFBP8478 | ||||
| 11935 | 86 aa hypothetical protein | |||
| 11940 | M | M.XfaCO33ORF9800P (100% identity) | CGGCCG | M.Xfa78ORF11940P |
| 11945 | R | XfaCO33ORF9800P (100% identity) | CGGCCG | Xfa78ORF11940P |
| 11950 | transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4750 | 3-oxoacyl-ACP synthase III | |||
| 4755 | M | M.XfaCO33ORF2725P (100% identity) | M.Xfa78ORF4755P | |
| 4760 | R | XfaCO33ORF2725P (100% identity) | Xfa78ORF4755P | |
| 4765 | alpha/beta fold hydrolase | |||