Xylella fastidiosa CO33 |
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Putative Xylella fastidiosa CO33 RM systems
Ref: Velasco-Amo,M.P. et al. unpublished
REBASE ref # 37744
| Sequence length: | GenBank #: | |
| Chromosome: | 2,628,698 bp | CP135132 |
| plasmid pXF-CO33: | 47,863 bp | CP135133 |
REBASE acronym: Xfa3
Org_num: 72424
All begin RO839_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1190 | M48 family metallopeptidase | |||
| 1195 | R | Xfa78ORF1220P (100% identity) | Xfa3ORF1210P | |
| 1200 | 58 aa hypothetical protein | |||
| 1205 | S | S.Xfa78ORF1220P (100% identity) | S.Xfa3ORF1210P | |
| ??? | M | M.XfaCO33ORF6365P (100% identity) | M.Xfa3ORF1210P | |
| 1230 | 45 aa hypothetical protein | |||
| 11560 | 56 aa hypothetical protein | |||
| 11565 | R | Xfa78ORF11590P (100% identity) | Xfa3ORF11575P | |
| 11570 | S | S.XfaCO33ORF170P (100% identity) | S.Xfa3ORF11575P | |
| 11575 | M | M.XfaCO33ORF170P (100% identity) | M.Xfa3ORF11575P | |
| 11580 | HNH endonuclease family protein | |||
| 11580 | HNH endonuclease family protein | |||
| 11585 | R | XfaCO33ORF145P (100% identity) | Xfa3ORF11580P | |
| 11590 | S | S.XfaOORFC7241P (75% identity) | S.Xfa3ORF11580P | |
| 11595 | 84 aa hypothetical protein | |||
| 11600 | M | M.XfaCO33ORF145P (100% identity) | M.Xfa3ORF11580P | |
| 11605 | LysE family translocator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3045 | ATP-binding protein | |||
| 3050 | M | M.Xfa78ORF3070P (100% identity) | M.Xfa3ORF3050P | |
| 3060 | R | XfaCO33ORF8725P (100% identity) | GTCGAC | Xfa3ORF3050P |
| 3065 | DUF262 domain-containing protein | |||
| 3405 | zinc finger-like domain-containing protein | |||
| 3410 | M | M.XfaCO33ORF2290P (100% identity) | M.Xfa3ORF3410P | |
| 3415 | lysozyme | |||
| 5625 | lysozyme | |||
| 5630 | M | M.XfaCO33ORF7400P (100% identity) | M.Xfa3ORF5630P | |
| 5635 | zinc finger-like domain-containing protein | |||
| 8465 | 206 aa hypothetical protein | |||
| 8470 | M | M.XfaCO33ORF11535P (100% identity) | TTCGAA | M.Xfa3ORF8470P |
| 8475 | R | Xfav13ORF8585P (99% identity) | TTCGAA | Xfa3ORF8470P |
| 8480 | 75 aa hypothetical protein | |||
| 8480 | 75 aa hypothetical protein | |||
| 8485 | R | XfaCO33ORF11520P (100% identity) | RGATCY | Xfa3ORF8490P |
| 8490 | M | M.XfaCO33ORF11520P (100% identity) | RGATCY | M.Xfa3ORF8490P |
| 8495 | 75 aa hypothetical protein | |||
| 9350 | DNA primase | |||
| 9355 | R | Xfa78ORF9375P (100% identity) | Xfa3ORF9360P | |
| ??? | M | M.XfaCO33ORF3840P (100% identity) | M.Xfa3ORF9360P | |
| 9370 | tryptophan--tRNA ligase | |||
| plasmid pXF-CO33 | ||||
| 11940 | 73 aa hypothetical protein | |||
| 11945 | M | M.XfaCO33ORF9800P (100% identity) | CGGCCG | M.Xfa3ORF11945P |
| 11950 | R | XfaCO33ORF9800P (100% identity) | CGGCCG | Xfa3ORF11945P |
| 11955 | transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4740 | 3-oxoacyl-ACP synthase III | |||
| 4745 | M | M.XfaCO33ORF2725P (100% identity) | M.Xfa3ORF4745P | |
| 4750 | R | XfaCO33ORF2725P (100% identity) | Xfa3ORF4745P | |
| 4755 | alpha/beta fold hydrolase | |||