Escherichia coli TW14425 |
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Putative Escherichia coli TW14425 RM systems
Ref: Kjellin,J. et al. unpublished
REBASE ref # 37653
| Sequence length: | GenBank #: | |
| Chromosome: | 4,943,650 bp | CP127265 |
| plasmid pTW14425_123.7k: | 123,716 bp | CP127268 |
| plasmid pTW14425_76.4k: | 76,371 bp | CP127266 |
REBASE acronym: Eco425
Org_num: 72197
All begin QMY53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3225 | 81 aa hypothetical protein | |||
| 3226 | R | Sen12509ORF5865P (99% identity) | ACAYNNNNCTG | Eco425ORF3228P |
| 3227 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco425ORF3228P |
| 3228 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.Eco425ORF3228P |
| 3229 | 298 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18 | Anti-adapter protein IraM | |||
| 22 | M | M.SsoCS14ORF10750P (100% identity) | A | M.Eco425ORF22P |
| 23 | 65 aa hypothetical protein | |||
| 332 | 804 aa hypothetical protein | |||
| 333 | M | M.EcoR70ORF6410P (100% identity) | GATC | M.Eco425ORF333P |
| 334 | protein YbiI | |||
| 695 | LexA repressor | |||
| 696 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco425ORF696P |
| 697 | 162 aa hypothetical protein | |||
| 1026 | LexA repressor | |||
| 1027 | M | M.Sso90ORF15820P (99% identity) | GATC | M.Eco425ORF1027P |
| 1028 | 164 aa hypothetical protein | |||
| 1344 | 67 aa hypothetical protein | |||
| 1345 | M | M.Sso63633ORF22290P (100% identity) | M.Eco425ORF1345P | |
| 1346 | 71 aa hypothetical protein | |||
| 1418 | RM | EcoS43ORF6000P (99% identity) | Eco425ORF1418P | |
| 1419 | RNA polymerase-associated protein RapA | |||
| 2397 | Cell division protein DamX | |||
| 2398 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco425DamP |
| 2399 | Ribulose-phosphate 3-epimerase | |||
| 2523 | 59 aa hypothetical protein | |||
| 2524 | M | M.Ssp28760ORF20045P (99% identity) | ATGCAT | M.Eco425ORF2524P |
| 2525 | DNA-binding protein Fis | |||
| 3350 | 64 aa hypothetical protein | |||
| 3351 | M | M.EcoLc41ORF6210P (100% identity) | M.Eco425ORF3351P | |
| 3352 | 83 aa hypothetical protein | |||
| plasmid pTW14425_123.7k | ||||
| 4969 | 73 aa hypothetical protein | |||
| 4970 | M | M.Sso8ORF23800P (100% identity) | SAY | M.Eco425ORF4970P |
| 4971 | 308 aa hypothetical protein | |||
| plasmid pTW14425_76.4k | ||||
| 4850 | 73 aa hypothetical protein | |||
| 4851 | M | M.Ecos69ORF26765P (100% identity) | M.Eco425ORF4851P | |
| 4852 | 308 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3770 | DNA-invertase hin | |||
| 3771 | R | Ecochi7122GmrSDP (100% identity) | Eco425GmrSDP | |
| 3772 | IS3 family transposase, partial | |||