Escherichia coli 19213 |
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Putative Escherichia coli 19213 RM systems
Ref: Timmer,B. et al. unpublished
REBASE ref # 37408
Complete sequence: 4,606,276 bp
GenBank #: CP135077
REBASE acronym: Eco19213
Org_num: 71910
All begin RBJ50_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19440 | adenine/cytosine-specific restriction | |||
| 19445 | R | Msa17ORFC2P (98% identity) | AACNNNNNNGTGC | Eco19213ORF19450P |
| 19450 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco19213ORF19450P |
| 19455 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco19213ORF19450P |
| 19460 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1670 | cell division protein DamX | |||
| 1675 | M | M.EcoMEC0003DamP (100% identity) | GATC | M.Eco19213DamP |
| 1680 | ribulose-phosphate 3-epimerase | |||
| 2295 | DUF2556 family protein | |||
| 2300 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco19213ORF2300P |
| 2305 | DNA-binding transcriptional regulator Fis | |||
| 8875 | phosphohydrolase | |||
| 8880 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco19213DcmP |
| 8885 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco19213DcmP |
| 8890 | drug/metabolite exporter YedA | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12905 | isocitrate/isopropylmalate family dehydrogenase | |||
| 12910 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco19213ORF12910P |
| 12915 | site-specific DNA recombinase | |||
| 19435 | GTPase | |||
| 19440 | R | SenHNK130MrrP (100% identity) | Eco19213MrrP | |
| 19445 | type I restriction-modification system | |||