Escherichia coli 4809 |
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Putative Escherichia coli 4809 RM systems
Ref: Shropshire,W.C. et al. unpublished
REBASE ref # 36584
| Sequence length: | GenBank #: | |
| Chromosome: | 4,660,810 bp | CP134936 |
| Chromosome: | 4,653,966 bp | CP134931 |
| plasmid pMB7669_2: | 70,341 bp | CP134938 |
| plasmid pMB7670_1: | 108,805 bp | CP134932 |
| plasmid pMB7670_2: | 70,342 bp | CP134933 |
| plasmid pMB7670_3: | 61,762 bp | CP134934 |
| plasmid pMB7699_1: | 108,805 bp | CP134937 |
REBASE acronym:
Org_num:
All begin RNP10_, RNP11_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8870 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.Eco4809ORF8870P |
| 8875 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.Eco4809ORF8870P |
| 8880 | restriction system-associated AAA family ATPase | |||
| Chromosome | ||||
| 8775 | M | M.Sen64034II (100% identity) | AGCNNNNNCTTC | M.Eco4809Ec2ORF8775P |
| 8780 | S | S.Sen64034II (100% identity) | AGCNNNNNCTTC | S.Eco4809Ec2ORF8775P |
| 8785 | restriction system-associated AAA family ATPase | |||
| plasmid pMB7669_2 | ||||
| 23550 | type II toxin-antitoxin system Phd/YefM family | |||
| 23555 | M | M.KpnKPA1ORF26345P (100% identity) | CAAYNNNNNCTGG | M.Eco4809ORF23555P |
| 23560 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.Eco4809ORF23555P |
| 23565 | R | EcosR11ORF25685P (100% identity) | CAAYNNNNNCTGG | Eco4809ORF23555P |
| 23570 | IS1-like element IS1A family transposase | |||
| plasmid pMB7670_2 | ||||
| 23495 | type II toxin-antitoxin system Phd/YefM family | |||
| 23500 | M | M.KpnKPA1ORF26345P (100% identity) | CAAYNNNNNCTGG | M.Eco4809Ec2ORF23500P |
| 23505 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.Eco4809Ec2ORF23500P |
| 23510 | R | EcosR11ORF25685P (100% identity) | CAAYNNNNNCTGG | Eco4809Ec2ORF23500P |
| 23515 | IS1-like element IS1A family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1820 | cell division protein DamX | |||
| 1825 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4809DamP |
| 1830 | ribulose-phosphate 3-epimerase | |||
| 2445 | DUF2556 family protein | |||
| 2450 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco4809ORF2450P |
| 2455 | DNA-binding transcriptional regulator Fis | |||
| 9150 | phosphohydrolase | |||
| 9155 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco4809DcmP |
| 9160 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Eco4809DcmP |
| 9165 | drug/metabolite exporter YedA | |||
| Chromosome | ||||
| 1725 | cell division protein DamX | |||
| 1730 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco4809Ec2DamP |
| 1735 | ribulose-phosphate 3-epimerase | |||
| 2350 | DUF2556 family protein | |||
| 2355 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco4809Ec2ORF2355P |
| 2360 | DNA-binding transcriptional regulator Fis | |||
| 9055 | phosphohydrolase | |||
| 9060 | M | M.EcosEC5DcmP (100% identity) | CCWGG | M.Eco4809Ec2DcmP |
| 9065 | V | V.EcosEC7DcmP (100% identity) | CCWGG | V.Eco4809Ec2DcmP |
| 9070 | drug/metabolite exporter YedA | |||
| plasmid pMB7669_2 | ||||
| 23240 | 103 aa hypothetical protein | |||
| 23245 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco4809ORF23245P |
| 23250 | 73 aa hypothetical protein | |||
| plasmid pMB7670_1 | ||||
| 22710 | 103 aa hypothetical protein | |||
| 22715 | M | M.Sso80ORF24890P (100% identity) | M.Eco4809Ec2ORF22715P | |
| 22720 | 73 aa hypothetical protein | |||
| plasmid pMB7670_2 | ||||
| 23185 | 103 aa hypothetical protein | |||
| 23190 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco4809Ec2ORF23190P |
| 23195 | 73 aa hypothetical protein | |||
| plasmid pMB7670_3 | ||||
| 23690 | 103 aa hypothetical protein | |||
| 23695 | M | M.EcoW082ORF26335P (100% identity) | M.Eco4809Ec2ORF23695P | |
| 23700 | 73 aa hypothetical protein | |||
| plasmid pMB7699_1 | ||||
| 23165 | 103 aa hypothetical protein | |||
| 23170 | M | M.Sso80ORF24890P (100% identity) | M.Eco4809ORF23170P | |
| 23175 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13105 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13110 | R | EcosEC27McrCP (100% identity) | Eco4809McrCP | |
| 13115 | R | EcoteDMcrBP (100% identity) | Eco4809McrBP | |
| 13120 | recombinase family protein | |||
| Chromosome | ||||
| 13010 | isocitrate/isopropylmalate family dehydrogenase | |||
| 13015 | R | EmaE2C08McrCP (100% identity) | Eco4809Ec2McrCP | |
| 13020 | R | EcoteDMcrBP (100% identity) | Eco4809Ec2McrBP | |
| 13025 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14645 | replication endonuclease | |||
| 14650 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco4809ORF14650P |
| 14655 | TraR/DksA family transcriptional regulator | |||
| Chromosome | ||||
| 14550 | replication endonuclease | |||
| 14555 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco4809Ec2ORF14555P |
| 14560 | TraR/DksA family transcriptional regulator | |||