Escherichia coli DH5-alpha-pBACpAK-KAN |
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Putative Escherichia coli DH5-alpha-pBACpAK-KAN RM systems
Ref: Goodman,R.N. et al. J Microbiol Methods 213, 106813 (2023)
REBASE ref # 37506
Complete sequence: 4,584,758 bp
GenBank #: CP125695
REBASE acronym: EcoAN
Org_num: 71607
All begin QL115_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2435 | cell division protein DamX | |||
| 2440 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoANDamP |
| 2445 | ribulose-phosphate 3-epimerase | |||
| 3060 | DUF2556 family protein | |||
| 3065 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoANORF3065P |
| 3070 | DNA-binding transcriptional regulator Fis | |||
| 9600 | phosphohydrolase | |||
| 9605 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoANDcmP |
| 9610 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoANDcmP |
| 9615 | drug/metabolite exporter YedA | |||
| 13570 | DUF1317 family protein | |||
| 13575 | M | M.SenHNK130ORF1185P (95% identity) | M.EcoANORF13575P | |
| 13580 | DUF4060 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14110 | isocitrate/isopropylmalate family dehydrogenase | |||
| 14115 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoANORF14115P |
| 14120 | site-specific DNA recombinase | |||
| 19785 | GTPase | |||
| 19790 | R | SenHNK130MrrP (100% identity) | EcoANMrrP | |
| 19795 | type I restriction-modification system | |||
| 19810 | endoribonuclease SymE | |||
| 19815 | R | SenHNK130McrBP (100% identity) | EcoANMcrBP | |
| 19820 | R | SenHNK130McrCP (100% identity) | EcoANMcrCP | |
| 19825 | 978 aa hypothetical protein | |||