Escherichia coli EPSSH018 |
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Putative Escherichia coli EPSSH018 RM systems
Ref: Gao,G. unpublished
REBASE ref # 37504
Complete sequence: 5,464,264 bp
GenBank #: CP125889
REBASE acronym: Eco018
Org_num: 71621
All begin QMY08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11585 | GTPase family protein | |||
| 11590 | M | M.Eco45C21ORF22855P (99% identity) | M2.Eco018ORF11590P | |
| 11595 | S | S.EcoWCTORF3505P (66% identity) | S1.Eco018ORF11590P | |
| 11600 | R | Sfl877IIP (99% identity) | Eco018ORF11590P | |
| 11605 | IS5-like element ISKpn26 family transposase | |||
| 11610 | M | M.EcoNT1W25ORFFP (99% identity) | M1.Eco018ORF11590P | |
| 11615 | S | S.EcoNT1W25ORFFP (100% identity) | S2.Eco018ORF11590P | |
| 11620 | DDE-type integrase/transposase/recombinase | |||
| 19030 | endoribonuclease SymE | |||
| 19035 | S | S.EcoSTEC508ORF24455P (100% identity) | TACNNNNNNNRTRTC | S.Eco018ORF19040P |
| 19040 | M | M.Sbo192ORF9605P (100% identity) | TACNNNNNNNRTRTC | M.Eco018ORF19040P |
| 19045 | R | EcosLF82ORF3455P (100% identity) | TACNNNNNNNRTRTC | Eco018ORF19040P |
| 19050 | 322 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4785 | drug/metabolite exporter YedA | |||
| 4790 | V | V.EcoPM22DcmP (100% identity) | V.Eco018DcmP | |
| 4795 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco018DcmP |
| 4800 | phosphohydrolase | |||
| 6725 | NinE family protein | |||
| 6730 | M | M.Ecoph2011ORFAP (99% identity) | GATC | M.Eco018ORF6730P |
| 6735 | recombination protein NinB | |||
| 12790 | DNA-binding transcriptional regulator Fis | |||
| 12795 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco018ORF12795P |
| 12800 | DUF2556 family protein | |||
| 13355 | ribulose-phosphate 3-epimerase | |||
| 13360 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco018DamP |
| 13365 | cell division protein DamX | |||
| 23785 | recombination protein NinB | |||
| 23790 | M | M.Eco972ORF7485P (100% identity) | GATC | M.Eco018ORF23790P |
| 23795 | NinE family protein | |||
| 26250 | TrmB family transcriptional regulator | |||
| 26255 | M | M.EcoDCE7ORF11470P (99% identity) | M.Eco018ORF26255P | |
| 26270 | DUF3927 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19015 | DUF1127 domain-containing protein | |||
| ??? | R | EcoSTEC508GmrSDP (100% identity) | Eco018GmrSDP | |
| 19030 | endoribonuclease SymE | |||