Escherichia fergusonii 22C065LT |
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Putative Escherichia fergusonii 22C065LT RM systems
Ref: Kakita,T. et al. unpublished
REBASE ref # 37455
| Sequence length: | GenBank #: | |
| Chromosome: | 4,543,606 bp | AP028858 |
| plasmid p22C065LT2: | 122,823 bp | AP028860 |
| plasmid p22C065LT3: | 95,142 bp | AP028861 |
REBASE acronym: Efe5LT
Org_num: 71422
All begin Ef22C065LT_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 32830 | 48 aa hypothetical protein | |||
| 32840 | S | S.SflN101ORF19075P (100% identity) | GAACNNNNNTGC | S.Efe5LTORF32850P |
| 32850 | M | M.Sen6640ORF2690P (100% identity) | GAACNNNNNTGC | M.Efe5LTORF32850P |
| 32860 | R | EmaC12ORF18910P (100% identity) | GAACNNNNNTGC | Efe5LTORF32850P |
| 32870 | 74 aa hypothetical protein | |||
| 35070 | 119 aa hypothetical protein | |||
| 35080 | R | Efe9LTORF34980P (100% identity) | Efe5LTORF35090P | |
| 35090 | M | M.SflTORF4636P (98% identity) | M.Efe5LTORF35090P | |
| 35100 | S | S.Efe9LTORF34980P (100% identity) | S.Efe5LTORF35090P | |
| 35110 | endoribonuclease SymE | |||
| plasmid p22C065LT2 | ||||
| 44100 | 75 aa hypothetical protein | |||
| 44110 | M | M.Efe7LTORF43470P (100% identity) | GAGNNNNNRTGA | M.Efe5LTORF44110P |
| 44120 | S | S.Efe9LTORF43980P (100% identity) | GAGNNNNNRTGA | S.Efe5LTORF44110P |
| 44130 | R | Efe9LTORF43980P (100% identity) | GAGNNNNNRTGA | Efe5LTORF44110P |
| 44140 | 168 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2240 | bifunctional isocitrate dehydrogenase | |||
| 2250 | M | M.EfeTORF2210P (100% identity) | CCWGG | M.Efe5LTORF2250P |
| 2260 | glyoxylate bypass operon transcriptional | |||
| 25450 | protein NinF | |||
| 25460 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Efe5LTORF25460P |
| 25470 | 200 aa hypothetical protein | |||
| 35260 | anti-phage ZorAB system protein ZorA | |||
| 35270 | M | M.Efe9LTDndBP (100% identity) | M.Efe5LTDndBP | |
| 35280 | DNA phosphorothioation system sulfurtransferase | |||
| 35270 | DNA sulfur modification protein DndB | |||
| 35280 | M | M.Efe9LTDndCP (100% identity) | M.Efe5LTDndCP | |
| 35290 | DNA sulfur modification protein DndD | |||
| 35280 | DNA phosphorothioation system sulfurtransferase | |||
| 35290 | M | M.Efe9LTDndDP (100% identity) | M.Efe5LTDndDP | |
| 35300 | 117 aa hypothetical protein | |||
| 35290 | DNA sulfur modification protein DndD | |||
| 35300 | M | M.Efe9LTDndEP (100% identity) | M.Efe5LTDndEP | |
| 35310 | DGQHR domain-containing protein | |||
| 35320 | 174 aa hypothetical protein | |||
| 35330 | R | Efe9LTDptHP (100% identity) | Efe5LTDptHP | |
| 35340 | 440 aa hypothetical protein | |||
| 35330 | 1695 aa hypothetical protein | |||
| 35340 | R | Efe9LTDptGP (100% identity) | Efe5LTDptGP | |
| 35350 | 549 aa hypothetical protein | |||
| 35340 | 440 aa hypothetical protein | |||
| 35350 | R | Efe9LTDptFP (100% identity) | Efe5LTDptFP | |
| 35360 | integrase arm-type DNA-binding domain-containing | |||
| 36620 | DNA-binding transcriptional regulator Fis | |||
| 36630 | M | M.EfeTORF37040P (100% identity) | ATGCAT | M.Efe5LTORF36630P |
| 36640 | DUF2556 family protein | |||
| 37610 | ribulose-phosphate 3-epimerase | |||
| 37620 | M | M.EfeEF04DamP (100% identity) | GATC | M.Efe5LTDamP |
| 37630 | cell division protein DamX | |||
| plasmid p22C065LT2 | ||||
| 44330 | 97 aa hypothetical protein | |||
| 44340 | M | M.Efe9LTORF44210P (100% identity) | M.Efe5LTORF44340P | |
| 44350 | recombination-associated protein RdgC | |||
| plasmid p22C065LT3 | ||||
| 44830 | DUF1281 domain-containing protein | |||
| 44840 | M | M.SspPIBORF23080P (100% identity) | M.Efe5LTORF44840P | |
| 44850 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 35110 | endoribonuclease SymE | |||
| 35120 | R | Efe9LTGmrSDP (100% identity) | Efe5LTGmrSDP | |
| 35130 | DUF1127 domain-containing protein | |||
| 35180 | DUF445 domain-containing protein | |||
| 35200 | R | Efe9LTMrrP (100% identity) | Efe5LTMrrP | |
| 35210 | 228 aa hypothetical protein | |||