Escherichia coli CUVET20-PYO1 |
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Putative Escherichia coli CUVET20-PYO1 RM systems
Ref: Sroithongkham,P. et al. unpublished
REBASE ref # 37451
Complete sequence: 5,084,250 bp
GenBank #: CP115390
REBASE acronym: EcoO1
Org_num: 71399
All begin PCS88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18605 | type IV toxin-antitoxin system AbiEi family | |||
| 18610 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoO1ORF18615P |
| 18615 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoO1ORF18615P |
| 18620 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoO1ORF18615P |
| 18625 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoO1DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 family protein | |||
| 2330 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoO1ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 10180 | phosphohydrolase | |||
| 10185 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoO1DcmP |
| 10190 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoO1DcmP |
| 10195 | drug/metabolite exporter YedA | |||
| 14385 | DUF3927 family protein | |||
| 14400 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoO1ORF14400P |
| 14405 | TrmB family transcriptional regulator | |||
| 20555 | McrC family protein | |||
| 20560 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoO1ORF20565P |
| 20565 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoO1ORF20565P |
| 20570 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoO1ORF20565P |
| 20575 | helix-turn-helix domain-containing protein | |||
| 20840 | 174 aa hypothetical protein | |||
| 20845 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoO1ORF20845P |
| 20850 | ATP-binding protein | |||
| 20855 | response regulator receiver domain | |||
| 20860 | R | Ecos19ORF20635P (100% identity) | EcoO1ORF20860P | |
| 20865 | 97 aa hypothetical protein | |||
| 21835 | response regulator receiver domain | |||
| 21840 | R | EcosS3ORF15775P (100% identity) | EcoO1ORF21845P | |
| 21845 | M | M.EcosS3ORF15775P (100% identity) | M.EcoO1ORF21845P | |
| 21850 | conjugal transfer protein TraG N-terminal | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9980 | shufflon system plasmid conjugative transfer | |||
| 9985 | R | Ecost88ORF24685P (100% identity) | EcoO1ORF9990P | |
| 9990 | M | M.EcosS2ORF3675P (100% identity) | M.EcoO1ORF9990P | |
| 9995 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20545 | glycosyltransferase | |||
| 20550 | R | EcosS3McrBP (100% identity) | EcoO1McrBP | |
| 20555 | R | EcosS9McrCP (100% identity) | EcoO1McrCP | |
| 20560 | Alw26I/Eco31I/Esp3I family type II restriction | |||