Escherichia coli CUVET16-242 |
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Putative Escherichia coli CUVET16-242 RM systems
Ref: Sroithongkham,P. et al. unpublished
REBASE ref # 37451
| Sequence length: | GenBank #: | |
| Chromosome: | 4,983,109 bp | CP115333 |
| plasmid pCUVET16-242.2: | 92,087 bp | CP115335 |
REBASE acronym: Eco242
Org_num: 71387
All begin PCS78_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1670 | cell division protein DamX | |||
| 1675 | M | M.UbaC1152DamP (97% identity) | GATC | M.Eco242DamP |
| 1680 | ribulose-phosphate 3-epimerase | |||
| 2305 | DUF2556 family protein | |||
| 2310 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco242ORF2310P |
| 2315 | DNA-binding transcriptional regulator Fis | |||
| 6175 | DUF1382 family protein | |||
| 6180 | M | M.EcoFP3ORF11405P (99% identity) | M.Eco242ORF6180P | |
| 6185 | PerC family transcriptional regulator | |||
| 9495 | phosphohydrolase | |||
| 9500 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco242DcmP |
| 9505 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.Eco242DcmP |
| 9510 | drug/metabolite exporter YedA | |||
| 15600 | replication endonuclease | |||
| 15605 | M | M.SflLIN17ORF14475P (100% identity) | GATC | M.Eco242ORF15605P |
| 15610 | TraR/DksA family transcriptional regulator | |||
| 18810 | phage lysis protein EssD | |||
| 18815 | M | M.SflN116ORF17735P (100% identity) | M.Eco242ORF18815P | |
| 18820 | 67 aa hypothetical protein | |||
| 18830 | 175 aa hypothetical protein | |||
| 18835 | M | M.SflN116ORF17750P (100% identity) | M.Eco242ORF18835P | |
| 18840 | antiterminator Q family protein | |||
| 20705 | HNH endonuclease | |||
| 20710 | R | Sso8ORF19860P (100% identity) | Eco242ORF20710P | |
| 20715 | 55 aa hypothetical protein | |||
| 21880 | transposase | |||
| 21885 | R | SflFF80ORF21000P (100% identity) | YGGCCR | Eco242ORF21890P |
| 21890 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.Eco242ORF21890P |
| 21895 | integrase | |||
| plasmid pCUVET16-242.2 | ||||
| 25530 | 73 aa hypothetical protein | |||
| 25535 | M | M.Sen527ORF25750P (98% identity) | M.Eco242ORF25535P | |
| 25540 | 97 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18620 | IS5 family transposase | |||
| 18625 | R | SflN97McrCP (99% identity) | Eco242McrCP | |
| 18630 | R | SflN97McrBP (99% identity) | Eco242McrBP | |
| 18635 | zinc ribbon protein | |||