Fusobacterium nucleatum S-V3 |
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Putative Fusobacterium nucleatum S-V3 RM systems
Ref: Shimomura,Y. et al. unpublished
REBASE ref # 37456
Complete sequence: 2,140,279 bp
GenBank #: AP028642
REBASE acronym: FnuSV3
Org_num: 71433
All begin FNSV3_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14680 | MATE family efflux transporter | |||
| 14690 | R | FnuCV3ORF2500P (100% identity) | FnuSV3ORF14730P | |
| ??? | S | S2.Fnu037IIIP (100% identity) | S2.FnuSV3ORF14730P | |
| 14710 | S | S1.Fnu037III (98% identity) | YAGNNNNNNNTAYG | S1.FnuSV3ORF14730P |
| 14720 | virulence RhuM family protein | |||
| 14730 | M | M.FnuCV3ORF2500P (100% identity) | M.FnuSV3ORF14730P | |
| 14740 | cyclically-permuted mutarotase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7390 | 259 aa hypothetical protein | |||
| 7400 | RM | FnuCV3ORF9820P (100% identity) | CTTAATT | FnuSV3ORF7400P |
| 7410 | KAP family P-loop domain protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4040 | DUF4391 domain-containing protein | |||
| ??? | M | M2.FnuCV3ORF13110P (100% identity) | M1.FnuSV3ORF4050P | |
| 4080 | Abi family protein | |||
| ??? | M | M1.FnuCV3ORF13110P (100% identity) | M2.FnuSV3ORF4050P | |
| 4120 | R | FnuSB054ORF3665P (100% identity) | FnuSV3ORF4050P | |
| 4130 | bifunctional pyr operon transcriptional | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16700 | RidA family protein | |||
| 16710 | R | FnuCV3ORF520P (100% identity) | FnuSV3ORF16710P | |
| 16720 | 54 aa hypothetical protein | |||