Fusobacterium nucleatum C-V3 |
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Putative Fusobacterium nucleatum C-V3 RM systems
Ref: Shimomura,Y. et al. unpublished
REBASE ref # 37456
Complete sequence: 2,139,550 bp
GenBank #: AP028637
REBASE acronym: FnuCV3
Org_num: 71427
All begin FNCV3_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2490 | cyclically-permuted mutarotase family protein | |||
| 2500 | M | M.FnuSV3ORF14730P (100% identity) | M.FnuCV3ORF2500P | |
| 2510 | virulence RhuM family protein | |||
| 2520 | S | S1.FnuSV3ORF14730P (67% identity) | S.FnuCV3ORF2500P | |
| 2530 | R | FnuSV3ORF14730P (100% identity) | FnuCV3ORF2500P | |
| 2540 | MATE family efflux transporter | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9810 | KAP family P-loop domain protein | |||
| 9820 | RM | FnuSV3ORF7400P (100% identity) | CTTAATT | FnuCV3ORF9820P |
| 9830 | 259 aa hypothetical protein | |||
| 13760 | 479 aa hypothetical protein | |||
| 13770 | M | M.Fsp4113ORFKP (100% identity) | GATC | M1.FnuCV3ORF13770P |
| 13780 | 272 aa hypothetical protein | |||
| 13790 | R | FnuSV3ORF3410P (100% identity) | GATC | FnuCV3ORF13770P |
| 13800 | M | M1.FnuSV3ORF3410P (100% identity) | GATC | M2.FnuCV3ORF13770P |
| 13810 | DNA polymerase III subunit alpha | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 13090 | bifunctional pyr operon transcriptional | |||
| 13100 | R | FnuSV3ORF4050P (100% identity) | FnuCV3ORF13110P | |
| ??? | M | M2.FnuSV3ORF4050P (100% identity) | M1.FnuCV3ORF13110P | |
| 13140 | Abi family protein | |||
| ??? | M | M1.FnuSV3ORF4050P (100% identity) | M2.FnuCV3ORF13110P | |
| 13180 | DUF4391 domain-containing protein | |||