Fusobacterium nucleatum C-P4 |
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Putative Fusobacterium nucleatum C-P4 RM systems
Ref: Shimomura,Y. et al. unpublished
REBASE ref # 37456
Complete sequence: 2,465,474 bp
GenBank #: AP028636
REBASE acronym: FnuCP4
Org_num: 71426
All begin FNCP4_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 220 | ArsB/NhaD family transporter | |||
| 230 | M | M.FnuSP4ORF6180P (100% identity) | GCATC | M.FnuCP4ORF230P |
| 240 | biotin--[acetyl-CoA-carboxylase] ligase | |||
| 1870 | 50S ribosomal protein L28 | |||
| 1880 | R | FnuSP4ORF7840P (100% identity) | FnuCP4ORF1890P | |
| 1890 | M | M.FnuSP4ORF7840P (100% identity) | M.FnuCP4ORF1890P | |
| 1900 | ABC transporter ATP-binding protein | |||
| 5710 | tRNA pseudouridine(55) synthase TruB | |||
| 5720 | M | M.PcoORF4317P (51% identity) | M1.FnuCP4ORF5720P | |
| 5730 | M | M1.FnuCP4ORF5720P (51% identity) | M2.FnuCP4ORF5720P | |
| 5740 | R | Ega163ORF12520P (57% identity) | FnuCP4ORF5720P | |
| 5750 | DUF1353 domain-containing protein | |||
| 8000 | helix-turn-helix domain-containing protein | |||
| 8010 | RM | FnuSP4ORF13980P (100% identity) | GGNAAC | FnuCP4ORF8020P |
| 8020 | M | M.FnuSP4ORF13980P (100% identity) | CAAGAT | M.FnuCP4ORF8020P |
| 8030 | ATP-binding protein | |||
| 11420 | S9 family peptidase | |||
| 11430 | M | M.FnuSP4ORF17400P (100% identity) | M.FnuCP4ORF11430P | |
| 11440 | AAA family ATPase | |||
| 23400 | 144 aa hypothetical protein | |||
| 23410 | M | M.FnuSP4ORF5490P (100% identity) | CATG | M.FnuCP4ORF23410P |
| 23420 | 114 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19730 | RidA family protein | |||
| 19740 | R | FnuSP4ORF1830P (100% identity) | FnuCP4ORF19740P | |
| 19750 | DEAD/DEAH box helicase | |||