Gemmatimonadaceae bacterium 138 |
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Putative Gemmatimonadaceae bacterium 138 RM systems
Ref: Haufschild,T. et al. unpublished
REBASE ref # 37249
Complete sequence: 3,260,361 bp
GenBank #: CP130612
REBASE acronym: Gba138
Org_num: 69604
All begin Strain138_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 999 | 256 aa hypothetical protein | |||
| 1000 | R | Gba318ORF1007BP (100% identity) | Gba138ORF1007BP | |
| 1001 | DDE-type integrase/transposase/recombinase | |||
| 1002 | R | Gba318ORF1007AP (100% identity) | Gba138ORF1007AP | |
| 1003 | S | S.Gba318ORF1007P (100% identity) | S.Gba138ORF1007P | |
| 1004 | RhuM family protein | |||
| 1005 | IS481 family transposase | |||
| 1006 | RhuM family protein | |||
| 1007 | M | M.Gba318ORF1007P (100% identity) | M.Gba138ORF1007P | |
| 1008 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 192 | 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA | |||
| 193 | M | M.Gba318ORF193P (100% identity) | M.Gba138ORF193P | |
| 194 | 219 aa hypothetical protein | |||
| 449 | NYN domain-containing protein | |||
| 450 | RM | Gba318ORF450P (100% identity) | Gba138ORF450P | |
| 451 | 267 aa hypothetical protein | |||
| 738 | glutamate formimidoyltransferase | |||
| 739 | RM | Gba318ORF739P (100% identity) | Gba138ORF739P | |
| 740 | inositol monophosphatase family protein | |||
| 787 | vitamin B12-dependent ribonucleotide reductase | |||
| ??? | M | M.Gba318ORFAP (100% identity) | M.Gba138ORFAP | |
| 788 | FRG domain-containing protein | |||
| 789 | DUF262 domain-containing protein | |||
| 790 | R | Gba318ORF791P (100% identity) | Gba138ORF791P | |
| 791 | M | M.Gba318ORF791P (100% identity) | M.Gba138ORF791P | |
| 792 | V | V.Gba318ORF791P (100% identity) | V.Gba138ORF791P | |
| 793 | dihydrofolate reductase family protein | |||
| 2020 | 94 aa hypothetical protein | |||
| 2021 | RM | Gba318ORF2021P (100% identity) | Gba138ORF2022P | |
| 2022 | M | M2.Gba318ORF2021P (100% identity) | M2.Gba138ORF2022P | |
| 2023 | M | M1.Gba318ORF2021P (100% identity) | M1.Gba138ORF2022P | |
| 2024 | Fic family protein | |||
| 2125 | DUF4160 domain-containing protein | |||
| 2126 | R | Gba318ORF2126P (100% identity) | Gba138ORF2127P | |
| 2127 | M | M.Gba318ORF2126P (100% identity) | M.Gba138ORF2127P | |
| 2128 | 166 aa hypothetical protein | |||
| 2166 | type II toxin-antitoxin system RelE/ParE family | |||
| 2167 | M | M.Gba318ORF2166P (100% identity) | M.Gba138ORF2167P | |
| 2168 | R | Gba318ORF2166P (100% identity) | Gba138ORF2167P | |
| 2169 | IS3 family transposase | |||
| 2550 | 187 aa hypothetical protein | |||
| 2551 | RM | Gba318ORF2551P (100% identity) | Gba138ORF2551P | |
| 2552 | DEAD/DEAH box helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1942 | DNA-processing protein DprA | |||
| 1943 | R | Gba318ORF1943P (100% identity) | Gba138ORF1944P | |
| 1944 | M | M.Gba318ORF1943P (100% identity) | M.Gba138ORF1944P | |
| 1945 | DUF4391 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1007 | class I SAM-dependent DNA methyltransferase | |||
| 1008 | R | Gba318MrrP (100% identity) | Gba138MrrP | |
| 1009 | PIN domain-containing protein | |||