Escherichia coli MS15052 |
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Putative Escherichia coli MS15052 RM systems
Ref: Nhu,N.T.K. et al. unpublished
REBASE ref # 37246
Complete sequence: 5,174,067 bp
GenBank #: CP082097
REBASE acronym: Eco15052
Org_num: 69577
All begin K6129_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 25225 | endoribonuclease SymE | |||
| 25230 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.Eco15052ORF25235P |
| 25235 | M | M.Ecoppa1ORF6185P (100% identity) | CCANNNNNNNCTTC | M.Eco15052ORF25235P |
| 25240 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | Eco15052ORF25235P |
| 25245 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1400 | cell division protein ZapA | |||
| 1405 | M | M.Sbo812ORFAP (100% identity) | GATC | M.Eco15052ORF1405P |
| 1410 | DUF1317 domain-containing protein | |||
| 3085 | PerC family transcriptional regulator | |||
| 3090 | M | M.EcosEC8ORF20220P (100% identity) | GATC | M.Eco15052ORF3090P |
| 3095 | LexA family transcriptional regulator | |||
| 4720 | TraR/DksA family transcriptional regulator | |||
| 4725 | M | M.Ecoppa1ORF11250P (100% identity) | GATC | M.Eco15052ORF4725P |
| 4730 | replication endonuclease | |||
| 13780 | PerC family transcriptional regulator | |||
| 13785 | M | M.Esp911AORF3194P (100% identity) | GATC | M.Eco15052ORF13785P |
| 13790 | DUF1382 family protein | |||
| 14810 | LexA family transcriptional regulator | |||
| 14815 | M | M.Ecoppa1ORF22275P (100% identity) | GATC | M.Eco15052ORF14815P |
| 14820 | PerC family transcriptional regulator | |||
| 19015 | DNA-binding transcriptional regulator Fis | |||
| 19020 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco15052ORF19020P |
| 19025 | DUF2556 family protein | |||
| 19615 | ribulose-phosphate 3-epimerase | |||
| 19620 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco15052DamP |
| 19625 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14610 | DinI-like family protein | |||
| 14615 | R | EspFAAGmrSDP (100% identity) | Eco15052GmrSDP | |
| 14620 | recombinase family protein | |||
| 25240 | type I restriction-modification system | |||
| 25245 | R | EcosS1MrrP (100% identity) | Eco15052MrrP | |
| 25250 | GTPase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6410 | recombination protein NinB | |||
| 6415 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco15052ORF6415P |
| 6420 | NinE family protein | |||