Escherichia coli MS20649 |
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Putative Escherichia coli MS20649 RM systems
Ref: Nhu,N.T.K. et al. unpublished
REBASE ref # 37246
| Sequence length: | GenBank #: | |
| Chromosome: | 4,825,997 bp | CP082087 |
| plasmid pMS20649B: | 59,165 bp | CP082089 |
| plasmid pMS20649C: | 57,134 bp | CP082090 |
REBASE acronym: Eco20649
Org_num: 69580
All begin K6126_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2545 | 67 aa hypothetical protein | |||
| 2550 | M | M.EcoNC22ORF10915P (100% identity) | M.Eco20649ORF2550P | |
| 2555 | 63 aa hypothetical protein | |||
| 4305 | TraR/DksA family transcriptional regulator | |||
| 4310 | M | M.EcoO78ORF7950P (100% identity) | GATC | M.Eco20649ORF4310P |
| 4315 | 273 aa hypothetical protein | |||
| 9605 | drug/metabolite exporter YedA | |||
| 9610 | V | V.SflSTLE3DcmP (100% identity) | CCWGG | V.Eco20649DcmP |
| 9615 | M | M.EcoVEV11MDcmP (100% identity) | CCWGG | M.Eco20649DcmP |
| 9620 | phosphohydrolase | |||
| 11020 | 89 aa hypothetical protein | |||
| ??? | M | M.EcoVEV10FORF15720P (100% identity) | M.Eco20649ORF11025P | |
| 11035 | transcriptional regulator | |||
| 13190 | replication endonuclease | |||
| 13195 | M | M.Sen24760ORF10410P (100% identity) | GATC | M.Eco20649ORF13195P |
| 13200 | TraR/DksA family transcriptional regulator | |||
| 16940 | DNA-binding transcriptional regulator Fis | |||
| 16945 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco20649ORF16945P |
| 16950 | DUF2556 family protein | |||
| 17565 | ribulose-phosphate 3-epimerase | |||
| 17570 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco20649DamP |
| 17575 | cell division protein DamX | |||
| 21135 | PerC family transcriptional regulator | |||
| 21140 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco20649ORF21140P |
| 21145 | LexA family transcriptional regulator | |||
| 22580 | IS21-like element ISEc12 family helper ATPase | |||
| 22585 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco20649ORF22585P |
| 22590 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco20649ORF22585P |
| 22595 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco20649ORF22585P |
| 22600 | McrC family protein | |||
| plasmid pMS20649B | ||||
| 23820 | 73 aa hypothetical protein | |||
| 23825 | M | M.Sso866ORF27155P (100% identity) | M.Eco20649ORF23825P | |
| 23830 | 91 aa hypothetical protein | |||
| plasmid pMS20649C | ||||
| 24360 | recombinase family protein | |||
| 24055 | R | Ssp3CORF24390P (100% identity) | CCWGG | Eco20649ORF24060P |
| 24060 | M | M.Sso12984ORF5284P (100% identity) | CCWGG | M.Eco20649ORF24060P |
| 24065 | IS1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10955 | IS3-like element IS2 family transposase | |||
| 10960 | R | Ecochi7122GmrSDP (100% identity) | Eco20649GmrSDP | |
| 10965 | recombinase family protein | |||
| 22595 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 22600 | R | EcosS9McrCP (100% identity) | Eco20649McrCP | |
| 22605 | R | EcosS3McrBP (100% identity) | Eco20649McrBP | |
| 22610 | glycosyltransferase | |||