Escherichia coli MS21324 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli MS21324 RM systems
Ref: Nhu,N.T.K. et al. unpublished
REBASE ref # 37246
| Sequence length: | GenBank #: | |
| Chromosome: | 4,942,450 bp | CP082045 |
| plasmid pMS21324: | 114,224 bp | CP082046 |
REBASE acronym: Eco1324
Org_num: 69592
All begin K6134_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6340 | TrmB family transcriptional regulator | |||
| 6345 | M | M.SboBSORF1444P (100% identity) | A | M.Eco1324ORF6345P |
| 6365 | DUF1737 domain-containing protein | |||
| 13690 | class II holin family protein | |||
| 13695 | M | M.Sso63633ORF22290P (100% identity) | M.Eco1324ORF13695P | |
| 13700 | 67 aa hypothetical protein | |||
| 13730 | LexA family transcriptional regulator | |||
| 13735 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco1324ORF13735P |
| 13740 | 330 aa hypothetical protein | |||
| 13800 | AAA family ATPase | |||
| 13805 | M | M.Ecoi64ORF2425P (99% identity) | M.Eco1324ORF13805P | |
| 13810 | carbon starvation induced protein CsiD | |||
| 17055 | DNA-binding transcriptional regulator Fis | |||
| 17060 | M | M.PmeBin470ORFAP (99% identity) | ATGCAT | M.Eco1324ORF17060P |
| 17065 | DUF2556 family protein | |||
| 17655 | ribulose-phosphate 3-epimerase | |||
| 17660 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco1324DamP |
| 17665 | cell division protein DamX | |||
| 22945 | 97 aa hypothetical protein | |||
| 22950 | R | EcoSCU306ORF19130P (100% identity) | Eco1324ORF22950P | |
| 22955 | 607 aa hypothetical protein | |||
| 22960 | ATP-binding protein | |||
| 22965 | M | M.Sen5773ORF4471P (99% identity) | RCCGGY | M.Eco1324ORF22965P |
| 22970 | 174 aa hypothetical protein | |||
| 23215 | IS3 family transposase | |||
| 23220 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco1324ORF23220P |
| 23225 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco1324ORF23220P |
| 23230 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco1324ORF23220P |
| 23235 | McrC family protein | |||
| plasmid pMS21324 | ||||
| 24020 | 103 aa hypothetical protein | |||
| 24025 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.Eco1324ORF24025P |
| 24030 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23230 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 23235 | R | EcosS9McrCP (100% identity) | Eco1324McrCP | |
| 23240 | R | EcosS3McrBP (100% identity) | Eco1324McrBP | |
| 23245 | glycosyltransferase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5480 | recombination protein NinB | |||
| 5485 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco1324ORF5485P |
| 5490 | NinE family protein | |||