Rhodococcus ruber Y14 |
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Putative Rhodococcus ruber Y14 RM systems
Ref: Huang,Y. unpublished
REBASE ref # 28086
| Sequence length: | GenBank #: | |
| Chromosome: | 5,516,353 bp | CP129899 |
| plasmid unnamed1: | 153,610 bp | CP129900 |
| plasmid unnamed2: | 17,668 bp | CP129901 |
| plasmid unnamed3: | 184,317 bp | CP129902 |
| plasmid unnamed4: | 76,141 bp | CP129903 |
REBASE acronym: RruY14
Org_num: 69307
All begin QYN14_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17330 | 453 aa hypothetical protein | |||
| 17335 | R | RspDMF1ORF17880P (100% identity) | RruY14ORF17335P | |
| 17340 | 160 aa hypothetical protein | |||
| 17420 | PASTA domain-containing protein | |||
| 17425 | S | S.RspDMF1ORF17940P (100% identity) | S.RruY14ORF17430P | |
| 17430 | M | M.RruYT1ORF4992P (99% identity) | M.RruY14ORF17430P | |
| 17435 | 690 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3525 | nuclease-related domain-containing protein | |||
| 3530 | M | M.NruIII (60% identity) | M.RruY14ORF3530P | |
| 3535 | DEAD/DEAH box helicase family protein | |||
| 7610 | IS1380 family transposase | |||
| 7615 | RM | Rsp2GORF7490P (48% identity) | RruY14ORF7615AP | |
| 7620 | IS1380 family transposase | |||
| 7625 | RM | RspP52ORF16945P (24% identity) | RruY14ORF7615BP | |
| 7630 | DUF262 domain-containing protein | |||
| plasmid unnamed2 | ||||
| 26505 | helicase-related protein | |||
| 26510 | M | M.RpyJH2ORF25725P (69% identity) | M.RruY14ORF26510P | |
| 26515 | recombinase family protein | |||
| plasmid unnamed3 | ||||
| 26990 | 493 aa hypothetical protein | |||
| 26995 | RM | RpyYF3ORFDP (85% identity) | RruY14ORF26995P | |
| 27000 | DUF3800 domain-containing protein | |||
| plasmid unnamed4 | ||||
| 27515 | DISARM system SNF2-like helicase DrmD | |||
| 27520 | RM | RruP25ORFGP (96% identity) | RruY14ORF27520P | |
| 27525 | DISARM system helicase DrmA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid unnamed1 | ||||
| 26255 | 148 aa hypothetical protein | |||
| 26260 | R | Gam43602ORF20150P (90% identity) | RruY14ORF26265P | |
| 26265 | M | M.GspTK1ORF11600P (71% identity) | M.RruY14ORF26265P | |
| 26270 | 58 aa hypothetical protein | |||