Dickeya chrysanthemi BRR1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Dickeya chrysanthemi BRR1 RM systems
Ref: Thomas,A. and Saravanakumar,D. unpublished
REBASE ref # 37102
Complete sequence: 4,800,410 bp
GenBank #: CP128510
REBASE acronym: Dch1
Org_num: 68925
All begin QUF31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10205 | integrase arm-type DNA-binding domain-containing | |||
| 10210 | R | DzeA5410ORF16755P (98% identity) | Dch1ORF10225P | |
| 10215 | S | S.DzeCE2ORF2170P (69% identity) | S.Dch1ORF10225P | |
| 10220 | AAA family ATPase | |||
| 10225 | M | M.DzeCE2ORF2170P (99% identity) | M.Dch1ORF10225P | |
| 10230 | HNH endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10225 | class I SAM-dependent DNA methyltransferase | |||
| 10230 | R | DfaZXC1ORF9185P (98% identity) | Dch1ORF10230P | |
| 10235 | 191 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18955 | site-specific integrase | |||
| 18960 | M | M.Dze3531ORFEP (92% identity) | M.Dch1ORF18960P | |
| 18965 | R | Dpa2511ORFDP (96% identity) | Dch1ORF18960P | |
| 18970 | DEAD/DEAH box helicase family protein | |||
| 18965 | DEAD/DEAH box helicase family protein | |||
| 18970 | R | DspB569ORF3426P (98% identity) | Dch1ORF18975P | |
| 18975 | M | M.PcaPC1ORF851P (98% identity) | M.Dch1ORF18975P | |
| 18980 | phosphoenolpyruvate carboxykinase (ATP) | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10330 | 112 aa hypothetical protein | |||
| 10335 | R | DzeMcrBP (97% identity) | Dch1McrBP | |
| 10340 | R | Dch516McrCP (99% identity) | Dch1McrCP | |
| 10345 | 201 aa hypothetical protein | |||