Escherichia coli O78:H51 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli O78:H51 RM systems
Ref: Ha,E.-J. unpublished
REBASE ref # 37057
| Sequence length: | GenBank #: | |
| Chromosome: | 5,129,598 bp | CP126946 |
| Chromosome: | 5,086,337 bp | CP126931 |
| plasmid pEND_Eco 18005: | 204,838 bp | CP126947 |
| plasmid pEND_Eco 19025-2: | 90,722 bp | CP126933 |
REBASE acronym: EcoE18005
Org_num: 68707
All begin QQA24_, QQA25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 22395 | IS66-like element ISCro1 family transposase | |||
| 22400 | R | EcoF247ORF27750P (100% identity) | GACNNNNNTRRG | EcoE18005IP |
| 22405 | S | S.EcoS19651ORF13565P (100% identity) | GACNNNNNTRRG | S.EcoE18005I |
| 22410 | M | M.EcoS19651ORF13565P (100% identity) | GACNNNNNTRRG | M.EcoE18005I |
| 22415 | DNA-binding protein | |||
| Chromosome | ||||
| 21370 | M48 family metallopeptidase | |||
| 21375 | M | M.Ecostr10ORF18570P (100% identity) | M.Eco19025ORF21375P | |
| 21380 | S | S.Ecostr10ORF18570P (100% identity) | S.Eco19025ORF21375P | |
| 21385 | 61 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1630 | BREX-1 system phosphatase PglZ type A | |||
| 1635 | RM | EcoC0792ORF19605P (100% identity) | EcoE18005ORF1635P | |
| 1640 | BREX system P-loop protein BrxC | |||
| 1655 | 332 aa hypothetical protein | |||
| 1660 | R | EcoPK8566ORF2340P (100% identity) | EcoE18005ORF1660P | |
| 1665 | HNH endonuclease | |||
| 2090 | PerC family transcriptional regulator | |||
| 2095 | M | M.Sso30ORF925P (100% identity) | GATC | M.EcoE18005ORF2095P |
| 2100 | LexA family transcriptional regulator | |||
| 2130 | 67 aa hypothetical protein | |||
| 2135 | M | M.Sdy9764ORFEP (100% identity) | M.EcoE18005ORF2135P | |
| 2140 | phage lysis protein EssD | |||
| 5295 | PerC family transcriptional regulator | |||
| 5300 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.EcoE18005ORF5300P |
| 5305 | LexA family transcriptional regulator | |||
| 7030 | TraR/DksA family transcriptional regulator | |||
| 7035 | M | M.SflP099ORF15630P (100% identity) | GATC | M.EcoE18005ORF7035P |
| 7040 | replication endonuclease | |||
| 12735 | drug/metabolite exporter YedA | |||
| 12740 | V | V.EcosEC71DcmP (100% identity) | V.EcoE18005DcmP | |
| 12745 | M | M.EcosEC71DcmP (100% identity) | CCWGG | M.EcoE18005DcmP |
| 12750 | phosphohydrolase | |||
| 20260 | DNA-binding transcriptional regulator Fis | |||
| 20265 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoE18005ORF20265P |
| 20270 | DUF2556 family protein | |||
| 20805 | ribulose-phosphate 3-epimerase | |||
| 20810 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoE18005DamP |
| 20815 | cell division protein DamX | |||
| 24750 | PerC family transcriptional regulator | |||
| 24755 | M | M.EcoXJ55ORF18610P (100% identity) | GATC | M.EcoE18005ORF24755P |
| 24760 | LexA family transcriptional regulator | |||
| Chromosome | ||||
| 1915 | cell division protein DamX | |||
| 1920 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco19025DamP |
| 1925 | ribulose-phosphate 3-epimerase | |||
| 2470 | DUF2556 family protein | |||
| 2475 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco19025ORF2475P |
| 2480 | DNA-binding transcriptional regulator Fis | |||
| 15875 | replication endonuclease | |||
| 15880 | M | M.SflP099ORF15630P (100% identity) | GATC | M.Eco19025ORF15880P |
| 15885 | TraR/DksA family transcriptional regulator | |||
| 17605 | LexA family transcriptional regulator | |||
| 17610 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Eco19025ORF17610P |
| 17615 | PerC family transcriptional regulator | |||
| 20855 | LexA family transcriptional regulator | |||
| 20860 | M | M.SflJ17BORF21785P (99% identity) | GATC | M.Eco19025ORF20860P |
| 20865 | PerC family transcriptional regulator | |||
| 21300 | HNH endonuclease | |||
| 21305 | R | EcoPK8566ORF2340P (100% identity) | Eco19025ORF21305P | |
| 21310 | 332 aa hypothetical protein | |||
| 21325 | BREX system P-loop protein BrxC | |||
| 21330 | RM | EcoE18005ORF1635P (100% identity) | Eco19025ORF21330P | |
| 21335 | BREX-1 system phosphatase PglZ type A | |||
| 23115 | LexA family transcriptional regulator | |||
| 23120 | M | M.EcoF104ORF2165P (100% identity) | GATC | M.Eco19025ORF23120P |
| 23125 | PerC family transcriptional regulator | |||
| plasmid pEND_Eco 18005 | ||||
| 25815 | PerC family transcriptional regulator | |||
| 25820 | M | M.EcoXJ55ORF18610P (100% identity) | GATC | M.EcoE18005ORF24755P |
| 25825 | LexA family transcriptional regulator | |||
| 25850 | 67 aa hypothetical protein | |||
| 25855 | M | M.EcoP61ORF17815P (100% identity) | M.EcoE18005ORF25855P | |
| 25860 | phage holin, lambda family | |||
| plasmid pEND_Eco 19025-2 | ||||
| 26105 | ead/Ea22-like family protein | |||
| 26110 | M | M.EcoEcC25ORFAP (100% identity) | M.Eco19025ORF26110P | |
| 26115 | 50 aa hypothetical protein | |||
| 26240 | 55 aa hypothetical protein | |||
| 26245 | M | M.Eco25985ORF25860P (100% identity) | M.Eco19025ORF26245P | |
| 25700 | recombination-associated protein RdgC | |||