Escherichia coli Ch1 |
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Putative Escherichia coli Ch1 RM systems
Ref: Mihailovskaya,V. et al. unpublished
REBASE ref # 36976
Complete sequence: 5,386,575 bp
GenBank #: CP127316
REBASE acronym: EcoCh1
Org_num: 68354
All begin QRM71_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 13415 | IS3 family transposase | |||
| 13420 | R | SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | EcoCh1ORF13435P |
| 13425 | S | S2.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | S.EcoCh1ORF13435P |
| 13430 | AAA family ATPase | |||
| 13435 | M | M.SenSI170ORF3660P (100% identity) | AGGNNNNNRTTG | M.EcoCh1ORF13435P |
| 13440 | transposase domain-containing protein | |||
| 20665 | endoribonuclease SymE | |||
| 20670 | S | S.SflN101ORF11675P (63% identity) | S2.EcoCh1ORF20680P | |
| 20675 | S | S.Eco4S17ORF39650P (36% identity) | S1.EcoCh1ORF20680P | |
| 20680 | M | M.SspS13ORF3945P (100% identity) | M.EcoCh1ORF20680P | |
| 20685 | R | EcoZ151ORF20685P (100% identity) | EcoCh1ORF20680P | |
| 20690 | DUF262 domain-containing HNH endonuclease family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6650 | drug/metabolite exporter YedA | |||
| 6655 | V | V.SflN116DcmP (100% identity) | CCWGG | V.EcoCh1DcmP |
| 6660 | M | M.SflN116DcmP (100% identity) | CCWGG | M.EcoCh1DcmP |
| 6665 | phosphohydrolase | |||
| 14485 | DNA-binding transcriptional regulator Fis | |||
| 14490 | M | M.Sdy12039ORFBP (99% identity) | ATGCAT | M.EcoCh1ORF14490P |
| 14495 | DUF2556 family protein | |||
| 15015 | ribulose-phosphate 3-epimerase | |||
| 15020 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoCh1DamP |
| 15025 | cell division protein DamX | |||
| 20455 | helicase YjhR | |||
| 20460 | R | EcoUM1886ORF23640P (100% identity) | EcoCh1ORF20460P | |
| 20465 | HNH endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20650 | DUF1127 domain-containing protein | |||
| ??? | R | Eco406GmrSDP (100% identity) | EcoCh1GmrSDP | |
| 20665 | endoribonuclease SymE | |||