Agrobacterium fabacearum H25/79 |
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Putative Agrobacterium fabacearum H25/79 RM systems
Ref: Weisberg,A.J. et al. Science 368 (6495) (2020)
REBASE ref # 36069
| Sequence length: | GenBank #: | |
| chromosome Linear: | 2,069,801 bp | CP123848 |
| plasmid pAtH25_79a: | 628,949 bp | CP123849 |
| plasmid pAtH25_79b: | 200,862 bp | CP123850 |
REBASE acronym: Afa2579
Org_num: 67770
All begin G6L82_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome Linear | ||||
| 22730 | DUF262 domain-containing protein | |||
| 22735 | M | M.MflKTORF2604P (85% identity) | M.Afa2579ORF22735P | |
| 22740 | S | S.JspS638ORF16540P (50% identity) | S.Afa2579ORF22735P | |
| 22745 | 195 aa hypothetical protein | |||
| 22750 | R | MflKTORF2604P (88% identity) | Afa2579ORF22735P | |
| 22755 | HNH endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome Linear | ||||
| 22750 | DEAD/DEAH box helicase family protein | |||
| 22755 | R | Rle969ORF2335P (73% identity) | Afa2579ORF22755P | |
| 22760 | Ti-type conjugative transfer relaxase TraA | |||
| plasmid pAtH25_79a | ||||
| 24050 | recombinase family protein | |||
| 24055 | R | AfaK224ORF23630P (99% identity) | Afa2579ORF24055P | |
| 24060 | BrnA antitoxin family protein | |||
| plasmid pAtH25_79b | ||||
| 26285 | 636 aa hypothetical protein | |||
| 26290 | R | AfaK224SspFP (100% identity) | Afa2579SspFP | |
| 26295 | R | AfaK224SspGP (100% identity) | Afa2579SspGP | |
| 26300 | R | M.AfaK224SspHP (92% identity) | Afa2579SspHP | |
| 26305 | M | M.AfaK224SspDP (100% identity) | M.Afa2579SspDP | |
| 26310 | M | M.AfaK224SspCP (100% identity) | M.Afa2579SspCP | |
| 26315 | M | M.AfaK224SspBP (100% identity) | M.Afa2579SspBP | |
| 26320 | M | M.AfaK224DndAP (100% identity) | M.Afa2579SspAP | |
| 26325 | 145 aa hypothetical protein | |||