Agrobacterium fabacearum 15-1187-1-2a |
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Putative Agrobacterium fabacearum 15-1187-1-2a RM systems
Ref: Davis Ii,E.W. et al. PeerJ 4, e2222 (2016)
REBASE ref # 35750
| Sequence length: | GenBank #: | |
| chromosome Circular: | 2,940,508 bp | CP123838 |
| chromosome Linear: | 2,071,026 bp | CP123839 |
REBASE acronym: Afa12a
Org_num: 67768
All begin A6U93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome Linear | ||||
| 14560 | restriction system-associated AAA family ATPase | |||
| 14565 | S | S.EspJK5ORF14815P (39% identity) | S.Afa12aORF14570P | |
| 14570 | M | M.Rsp13EORF23225P (91% identity) | M.Afa12aORF14570P | |
| 14575 | R | AtuWRT31ORFFP (91% identity) | Afa12aORF14570P | |
| 14580 | 807 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome Circular | ||||
| 7030 | 69 aa hypothetical protein | |||
| 7035 | M | M.AcuO132ORF7475P (78% identity) | M.Afa12aORF7035P | |
| 7040 | 100 aa hypothetical protein | |||
| chromosome Linear | ||||
| 14540 | 42 aa hypothetical protein | |||
| 14545 | R | RleVORF110102P (89% identity) | Afa12aORF14545P | |
| 14550 | restriction endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome Linear | ||||
| 14545 | HNH endonuclease | |||
| 14550 | R | SmeKH35cMrr2P (87% identity) | Afa12aMrrP | |
| 14555 | 355 aa hypothetical protein | |||