Escherichia coli HT-948 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli HT-948 RM systems
Ref: Majdalani,N. et al. unpublished
REBASE ref # 36928
Complete sequence: 4,608,707 bp
GenBank #: CP122317
REBASE acronym: Eco948
Org_num: 67975
All begin QCG49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14895 | adenine/cytosine-specific restriction | |||
| 14900 | R | EcoW25113ORF11385P (100% identity) | AACNNNNNNGTGC | Eco948ORF14905P |
| 14905 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco948ORF14905P |
| 14910 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco948ORF14905P |
| 14915 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2865 | drug/metabolite exporter YedA | |||
| 2870 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.Eco948DcmP |
| 2875 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco948DcmP |
| 2880 | phosphohydrolase | |||
| 9300 | DNA-binding transcriptional regulator Fis | |||
| 9305 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco948ORF9305P |
| 9310 | DUF2556 family protein | |||
| 9925 | ribulose-phosphate 3-epimerase | |||
| 9930 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco948DamP |
| 9935 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14915 | endoribonuclease SymE | |||
| 14920 | R | SenHNK130McrBP (100% identity) | Eco948McrBP | |
| 14925 | R | SenHNK130McrCP (100% identity) | Eco948McrCP | |
| 14930 | 978 aa hypothetical protein | |||
| 21170 | site-specific DNA recombinase | |||
| 21175 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco948ORF21175P |
| 21180 | isocitrate/isopropylmalate family dehydrogenase | |||