Escherichia coli JNE131328 |
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Putative Escherichia coli JNE131328 RM systems
Ref: Kubomura,A. et al. unpublished
REBASE ref # 36930
| Sequence length: | GenBank #: | |
| Chromosome: | 5,018,637 bp | AP027212 |
| plasmid pJNE131328-1: | 160,700 bp | AP027213 |
REBASE acronym: Eco1328
Org_num: 67989
All begin JNE131328_, JNE131328_p
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 46010 | 81 aa hypothetical protein | |||
| 46020 | S | S.Ecostr10ORF18570P (100% identity) | S.Eco1328ORF46030P | |
| 46030 | M | M.Ecostr10ORF18570P (100% identity) | M.Eco1328ORF46030P | |
| 46040 | 60 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12040 | 65 aa hypothetical protein | |||
| 12050 | M | M.Eco7807ORF540P (100% identity) | M.Eco1328ORF12050P | |
| 12060 | Shiga toxin 2 subunit A | |||
| 12920 | 57 aa hypothetical protein | |||
| 12930 | M | M.Ecostr10ORF1530P (100% identity) | GATC | M.Eco1328ORF12930P |
| 12940 | repressor | |||
| 14690 | 65 aa hypothetical protein | |||
| 14700 | M | M.Ecostr10ORF2400P (100% identity) | M.Eco1328ORF14700P | |
| 14710 | 142 aa hypothetical protein | |||
| 22010 | amino acid exporter for phenylalanine | |||
| 22020 | V | V.SflFF64DcmP (99% identity) | V.Eco1328DcmP | |
| 22030 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco1328DcmP |
| 22040 | HD superfamily phosphohydrolase | |||
| 23530 | phage portal protein | |||
| 23540 | M | M.EcoST130ORF15675P (90% identity) | GRGCYC | M.Eco1328ORF23540P |
| 23550 | C | C.Ecostr10ORF20P (100% identity) | C.Eco1328ORF23540P | |
| 23560 | R | Ecostr10ORF20P (100% identity) | GRGCYC | Eco1328ORF23540P |
| 23570 | replication protein | |||
| 36790 | D-ribulose-5-phosphate 3-epimerase | |||
| 36800 | M | M.SsoST152DamP (100% identity) | GATC | M.Eco1328DamP |
| 36810 | cell division protein DamX | |||
| 46090 | alkaline phosphatase | |||
| 46100 | RM | Ecostr10ORF18620P (100% identity) | Eco1328ORF46100P | |
| 46110 | ATPase-like protein | |||
| 46140 | 332 aa hypothetical protein | |||
| 46150 | R | Ecostr10ORF18645P (100% identity) | Eco1328ORF46150P | |
| 46160 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| plasmid pJNE131328-1 | ||||
| 11230 | 73 aa hypothetical protein | |||
| 11240 | M | M.Sso128ORF27515P (100% identity) | SAY | M.Eco1328ORF11240P |
| 11250 | 308 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13320 | DNA-invertase | |||
| 13330 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco1328ORF13330P |
| 13340 | 54 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7920 | recombination protein | |||
| 7930 | M | M.SflLIN11ORF7170P (100% identity) | GATC | M.Eco1328ORF7930P |
| 7940 | phage protein NinF | |||