Clostridium difficile 630 |
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Putative Clostridium difficile 630 RM systems
Ref: Sebaihia,M. et al. Nat. Genet. 38 (7), 779-786 (2006)
REBASE ref # 10067
Complete sequence: 4,290,252 bp
GenBank #: AM180355 (NC_009089)
REBASE acronym: Cdi630
Org_num: 3249
All begin CD630_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 9260 | phage protein | |||
| 9270 | M | M.PdiZ31ORF1645P (100% identity) | M.Cdi630II | |
| 9280 | phage protein | |||
| 9341 | phage protein | |||
| 9350 | M | M.Pdi630ORF9350P (100% identity) | TGGCCA | M.Cdi630I |
| 9360 | phage endodeoxyribonuclease | |||
| 11080 | conjugative transposon protein | |||
| 11090 | M | M.Pdi630ORF11090P (100% identity) | CCSSGG | M.Cdi630III |
| 11100 | hydrolase Tn1549-like, CTn4-Orf9 | |||
| 27570 | phospholipase | |||
| 27580 | M | M.PdiZ31ORF1541P (100% identity) | CAAAAA | M.Cdi630V |
| 27590 | Transcriptional regulator, Rrf2 family | |||
| 31461 | Fragment of putative transposase, IS4 family | |||
| 31470 | M | M.Pdi6602ORF710333P (100% identity) | GCNGC | M.Cdi630IV |
| 31480 | 872 aa Hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20920 | Transcriptional regulator, sigma-54-dependent | |||
| 20930 | R | Pdi630McrCP (100% identity) | Cdi630McrCP | |
| 20940 | R | Pdi6602McrBP (100% identity) | Cdi630McrBP | |
| 20950 | cell division GTPase | |||