Escherichia coli LR-50 |
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Putative Escherichia coli LR-50 RM systems
Ref: Hoang,H.T.T. et al. J Glob Antimicrob Resist 30, 152-154 (2022)
REBASE ref # 36782
| Sequence length: | GenBank #: | |
| Chromosome: | 4,693,497 bp | AP025551 |
| plasmid pLR-50: | 197,729 bp | AP025552 |
REBASE acronym: EcoLR50
Org_num: 67415
All begin EEGS03_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17780 | 208 aa hypothetical protein | |||
| 17790 | M | M.EcoYPE12ORF11395P (100% identity) | M.EcoLR50ORF17790P | |
| 17800 | S | S.Eco0204ORF9505P (99% identity) | S.EcoLR50ORF17790P | |
| 17810 | 227 aa hypothetical protein | |||
| 17820 | 336 aa hypothetical protein | |||
| 17830 | R | Eco0204ORF9505P (100% identity) | EcoLR50ORF17790P | |
| 17840 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3220 | cell division protein DamX | |||
| 3230 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoLR50DamP |
| 3240 | ribulose-phosphate 3-epimerase | |||
| 4390 | acrEF/envCD operon repressor | |||
| 4400 | M | M.Sso8ORF2545P (99% identity) | ATGCAT | M.EcoLR50ORF4400P |
| 4410 | DNA-binding protein Fis | |||
| 16300 | NinB protein | |||
| 16310 | M | M.Eco9071ORF1464P (100% identity) | GATC | M.EcoLR50ORF16310P |
| 16320 | protein ninF | |||
| 17190 | 231 aa hypothetical protein | |||
| 17200 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoLR50DcmP |
| 17210 | V | V.SsoSE61DcmP (100% identity) | CCWGG | V.EcoLR50DcmP |
| 17220 | multidrug transporter | |||
| 28260 | replication endonuclease from | |||
| 28270 | M | M.KpnTGH8ORF18000P (100% identity) | GATC | M.EcoLR50ORF28270P |
| 28280 | 100 aa hypothetical protein | |||
| 38140 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | |||
| ??? | R | EcoPSS04ORF37280P (100% identity) | EcoLR50ORF38150P | |
| 38170 | 332 aa hypothetical protein | |||
| 38210 | 79 aa hypothetical protein | |||
| 38220 | R | EcoPSS04ORF37360P (99% identity) | EcoLR50ORF38240P | |
| 38230 | 124 aa hypothetical protein | |||
| 38240 | M | M.EcoPSS04ORF37360P (100% identity) | M.EcoLR50ORF38240P | |
| 38250 | 947 aa hypothetical protein | |||
| plasmid pLR-50 | ||||
| 44370 | 55 aa hypothetical protein | |||
| 44380 | M | M.StyCORF187P (100% identity) | CCWGG | M.EcoLR50ORF44380P |
| 44390 | nuclease | |||
| 45620 | DNA-binding protein | |||
| 45630 | M | M.Ype21801ORF197P (100% identity) | M.EcoLR50ORF45630P | |
| 45640 | 217 aa hypothetical protein | |||