Edwardsiella ictaluri KH20906 |
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Putative Edwardsiella ictaluri KH20906 RM systems
Ref: Imajoh,M. and Kawahara,M. unpublished
REBASE ref # 36754
Complete sequence: 3,738,664 bp
GenBank #: AP028097
REBASE acronym: Eic906
Org_num: 67173
All begin KH20906_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 330 | 194 aa hypothetical protein | |||
| 340 | R | EicYCHORF180P (100% identity) | Eic906ORF350P | |
| 350 | M | M.EicYCHORF180P (100% identity) | M.Eic906ORF350P | |
| 360 | S | S1.Eic921ORF350P (100% identity) | S1.Eic906ORF350P | |
| 370 | 218 aa hypothetical protein | |||
| 380 | IS256-like element ISSoEn2 family transposase | |||
| 390 | S | S2.EicYCHORF180P (100% identity) | S2.Eic906ORF350P | |
| 400 | 328 aa hypothetical protein | |||
| 4830 | 140 aa hypothetical protein | |||
| 4840 | M | M.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | M.Eic906ORF4840P |
| 4850 | S | S.EicYCHORF2565P (100% identity) | GGANNNNNNNVTATC | S.Eic906ORF4840P |
| 4860 | R | EicORF518P (100% identity) | GGANNNNNNNVTATC | Eic906ORF4840P |
| 4870 | 53 aa hypothetical protein | |||
| 21960 | NADH oxidoreductase | |||
| 21970 | R | EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | Eic906ORF22000P |
| 21980 | Fic family protein | |||
| 21990 | S | S.EicORF2505P (100% identity) | CAYNNNNNNCCTC | S.Eic906ORF22000P |
| 22000 | M | M.EicYCHORF11465P (100% identity) | CAYNNNNNNCCTC | M.Eic906ORF22000P |
| 22010 | low-specificity L-threonine aldolase | |||
| 30200 | SprT family zinc-dependent metalloprotease | |||
| 30210 | R | EicYCHORF15685P (100% identity) | Eic906ORF30250P | |
| 30220 | macro domain-containing protein | |||
| 30230 | DUF4433 domain-containing protein | |||
| 30240 | S | S.Eic921ORF30350P (100% identity) | S.Eic906ORF30250P | |
| 30250 | M | M.EicYCHORF15685P (100% identity) | M.Eic906ORF30250P | |
| 30260 | 83 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2550 | TIGR03747 family integrating conjugative element | |||
| 2560 | R | EicYCHORF1525P (100% identity) | Eic906ORF2570P | |
| 2570 | M | M.EicYCHORF1525P (100% identity) | M.Eic906ORF2570P | |
| 2580 | RAQPRD family integrative conjugative element | |||
| 13190 | 215 aa hypothetical protein | |||
| 13200 | R | EicYCHORF6960P (100% identity) | CCWGG | Eic906ORF13210P |
| 13210 | M | M.EicYCHORF6960P (100% identity) | CCWGG | M.Eic906ORF13210P |
| 13220 | V | V.EicYCHORF6960P (100% identity) | V.Eic906ORF13210P | |
| 13230 | 49 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9050 | 349 aa hypothetical protein | |||
| ??? | R | EicYCHMcrBP (100% identity) | Eic906McrBP | |
| 9080 | R | Eic921McrCP (100% identity) | Eic906McrCP | |
| 9090 | 154 aa hypothetical protein | |||