Escherichia coli KFS-D29 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli KFS-D29 RM systems
Ref: Gomi,R. et al. unpublished
REBASE ref # 36781
| Sequence length: | GenBank #: | |
| Chromosome: | 4,732,148 bp | CP125009 |
| plasmid pKFS-D29_1: | 115,174 bp | CP125007 |
REBASE acronym: EcoD29
Org_num: 67403
All begin QL146_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15510 | IS1-like element IS1A family transposase | |||
| 15515 | R | EcosNDM5ORF9185P (100% identity) | EcoD29ORF15515P | |
| 15520 | SprT family zinc-dependent metalloprotease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1150 | LexA family transcriptional regulator | |||
| 1155 | M | M.SflLIN17ORF17440P (100% identity) | GATC | M.EcoD29ORF1155P |
| 1160 | PerC family transcriptional regulator | |||
| 3050 | HNH endonuclease | |||
| 3055 | R | SflSTLE4ORF19250P (100% identity) | EcoD29ORF3055P | |
| 3060 | restriction endonuclease | |||
| 7790 | cell division protein DamX | |||
| 7795 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoD29DamP |
| 7800 | ribulose-phosphate 3-epimerase | |||
| 8420 | DUF2556 family protein | |||
| 8425 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.EcoD29ORF8425P |
| 8430 | DNA-binding transcriptional regulator Fis | |||
| 10105 | BREX-1 system phosphatase PglZ type A | |||
| 10110 | RM | EcoMN067ORF6665P (100% identity) | EcoD29ORF10110P | |
| 10115 | BREX system P-loop protein BrxC | |||
| 15220 | phosphohydrolase | |||
| 15225 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoD29DcmP |
| 15230 | V | V.EcoYJ4DcmP (100% identity) | V.EcoD29DcmP | |
| 15235 | drug/metabolite exporter YedA | |||
| 18815 | DUF3927 family protein | |||
| 18830 | M | M.SsoCS14ORF10750P (100% identity) | A | M.EcoD29ORF18830P |
| 18835 | TrmB family transcriptional regulator | |||
| plasmid pKFS-D29_1 | ||||
| 225 | 73 aa hypothetical protein | |||
| 230 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoD29ORF230P |
| 235 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 23735 | IS3-like element IS3 family transposase | |||
| 23740 | R | Ecop10BGmrSDP (100% identity) | EcoD29GmrSDP | |
| 23745 | 28 aa hypothetical protein | |||