Escherichia coli KFS-B04 |
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Putative Escherichia coli KFS-B04 RM systems
Ref: Gomi,R. et al. unpublished
REBASE ref # 36781
| Sequence length: | GenBank #: | |
| Chromosome: | 5,084,650 bp | CP125076 |
| plasmid pKFS-B04_1: | 104,558 bp | CP125077 |
REBASE acronym: EcoB04
Org_num: 67392
All begin QL138_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19410 | type IV toxin-antitoxin system AbiEi family | |||
| 19415 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoB04ORF19420P |
| 19420 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoB04ORF19420P |
| 19425 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoB04ORF19420P |
| 19430 | ash family protein | |||
| 21510 | restriction endonuclease | |||
| 21515 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoB04ORF21515P |
| 21520 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoB04ORF21515P |
| 21525 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoB04ORF21515P |
| 21530 | endoribonuclease SymE | |||
| plasmid pKFS-B04_1 | ||||
| 25420 | IS1-like element IS1A family transposase | |||
| 25425 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | EcoB04ORF25435P |
| 25430 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S1.EcoB04ORF25435P |
| 25435 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.EcoB04ORF25435P |
| 25440 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2325 | cell division protein DamX | |||
| 2330 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoB04DamP |
| 2335 | ribulose-phosphate 3-epimerase | |||
| 2935 | DUF2556 family protein | |||
| 2940 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoB04ORF2940P |
| 2945 | DNA-binding transcriptional regulator Fis | |||
| 10345 | phosphohydrolase | |||
| 10350 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.EcoB04DcmP |
| 10355 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoB04DcmP |
| 10360 | drug/metabolite exporter YedA | |||
| 13905 | DUF3927 family protein | |||
| 13920 | M | M.EcosS9ORF10680P (100% identity) | A | M.EcoB04ORF13920P |
| 13925 | TrmB family transcriptional regulator | |||
| 16180 | helix-turn-helix transcriptional regulator | |||
| 16185 | M | M.KpnYN1ORFGP (89% identity) | M.EcoB04ORF16185P | |
| 16190 | 71 aa hypothetical protein | |||
| 21255 | phage lysis protein EssD | |||
| 21260 | M | M.SflN116ORF17735P (100% identity) | M.EcoB04ORF21260P | |
| 21265 | 67 aa hypothetical protein | |||
| 21295 | LexA family transcriptional regulator | |||
| 21300 | M | M.SflN101ORF11410P (100% identity) | GATC | M.EcoB04ORF21300P |
| 21305 | PerC family transcriptional regulator | |||
| 21865 | McrC family protein | |||
| 21870 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoB04ORF21875P |
| 21875 | M | M2.EcosS9ORF2810P (99% identity) | GGTCTC | M1.EcoB04ORF21875P |
| 21880 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoB04ORF21875P |
| 21885 | helix-turn-helix domain-containing protein | |||
| plasmid pKFS-B04_1 | ||||
| 25360 | 73 aa hypothetical protein | |||
| 25365 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoB04ORF25365P |
| 25370 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21505 | BrnT family toxin | |||
| 21510 | R | Ecou021MrrP (100% identity) | EcoB04MrrP | |
| 21515 | class I SAM-dependent DNA methyltransferase | |||
| 21855 | glycosyltransferase | |||
| 21860 | R | EcosS3McrBP (100% identity) | EcoB04McrBP | |
| 21865 | R | EcosS9McrCP (100% identity) | EcoB04McrCP | |
| 21870 | Alw26I/Eco31I/Esp3I family type II restriction | |||