Escherichia coli ETEC4075 |
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Putative Escherichia coli ETEC4075 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 5,025,223 bp | CP122652 |
| plasmid unnamed2: | 109,222 bp | CP122654 |
REBASE acronym: Eco4075
Org_num: 67373
All begin QDW61_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3355 | IS3-like element IS3 family transposase | |||
| 3360 | M | M.Eco4068ORF3360P (100% identity) | ACTNNNNNNRTCG | M.Eco4075ORF3360P |
| 3365 | S | S.EcoB8S56ORF27280P (100% identity) | ACTNNNNNNRTCG | S.Eco4075ORF3360P |
| 3370 | DUF4268 domain-containing protein | |||
| 3375 | R | Eco4068ORF3360P (100% identity) | ACTNNNNNNRTCG | Eco4075ORF3360P |
| 3380 | transposase | |||
| 5980 | IS1 family transposase | |||
| 5985 | M | M.Eco4068ORF5990P (100% identity) | M.Eco4075ORF5985P | |
| 5990 | integrase core domain-containing protein | |||
| 19530 | type IV toxin-antitoxin system AbiEi family | |||
| 19535 | R | EcoP1525ORF5305P (100% identity) | CAACNNNNGTT | Eco4075ORF19540P |
| 19540 | M | M.EcoW1316ORF21120P (100% identity) | CAACNNNNGTT | M.Eco4075ORF19540P |
| 19545 | S | S.EcoW1316ORF21120P (100% identity) | CAACNNNNGTT | S.Eco4075ORF19540P |
| 19550 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1795 | cell division protein DamX | |||
| 1800 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco4075DamP |
| 1805 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 family protein | |||
| 2330 | M | M.EcoW1316ORF13330P (100% identity) | ATGCAT | M.Eco4075ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 6370 | Com family DNA-binding transcriptional | |||
| 6375 | M | M.SenYU39ORF1896P (100% identity) | M.Eco4075ORF6375P | |
| 6380 | ribosome-associated translation inhibitor RaiA | |||
| 6870 | DUF1382 family protein | |||
| 6875 | M | M.Eco4068ORF6630P (100% identity) | M.Eco4075ORF6875P | |
| 6880 | PerC family transcriptional regulator | |||
| 12175 | DUF977 family protein | |||
| 12180 | M | M.SsoSE61ORF20220P (100% identity) | M.Eco4075ORF12180P | |
| 12185 | 139 aa hypothetical protein | |||
| 14035 | Shiga toxin Stx2e subunit A | |||
| 14055 | M | M.EcoW1316ORF2195P (100% identity) | M.Eco4075ORF14055P | |
| 14060 | TrmB family transcriptional regulator | |||
| 15695 | 92 aa hypothetical protein | |||
| 15700 | M | M.EcoW26ORF35400P (100% identity) | M.Eco4075ORF15700P | |
| 15705 | TrmB family transcriptional regulator | |||
| plasmid unnamed2 | ||||
| 25405 | 101 aa hypothetical protein | |||
| 25410 | M | M.SspPIBORF23080P (100% identity) | M.Eco4075ORF25410P | |
| 25415 | 73 aa hypothetical protein | |||