Escherichia coli ETEC4071 |
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Putative Escherichia coli ETEC4071 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 5,067,019 bp | CP122673 |
| plasmid unnamed1: | 95,104 bp | CP122674 |
REBASE acronym: EcoC4071
Org_num: 67369
All begin QDW56_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5805 | IS1 family transposase | |||
| 5810 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoC4071ORF5820P |
| 5815 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoC4071ORF5820P |
| 5820 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcoC4071ORF5820P |
| 5825 | integrase core domain-containing protein | |||
| 15360 | GTPase family protein | |||
| 15365 | M | M.EcoW1316ORF930P (100% identity) | M.EcoC4071ORF15365P | |
| 15370 | S | S.EcoW1316ORF930P (100% identity) | S.EcoC4071ORF15365P | |
| 15375 | R | EcoW1316ORF930P (100% identity) | EcoC4071ORF15365P | |
| 15380 | IS5-like element ISKpn26 family transposase | |||
| 19620 | type IV toxin-antitoxin system AbiEi family | |||
| 19625 | R | EcoP1525ORF5305P (100% identity) | CAACNNNNGTT | EcoC4071ORF19630P |
| 19630 | M | M.EcoW1316ORF21120P (100% identity) | CAACNNNNGTT | M.EcoC4071ORF19630P |
| 19635 | S | S.EcoW1316ORF21120P (100% identity) | CAACNNNNGTT | S.EcoC4071ORF19630P |
| 19640 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1785 | cell division protein DamX | |||
| 1790 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC4071DamP |
| 1795 | ribulose-phosphate 3-epimerase | |||
| 2315 | DUF2556 family protein | |||
| 2320 | M | M.EcoW1316ORF13330P (100% identity) | ATGCAT | M.EcoC4071ORF2320P |
| 2325 | DNA-binding transcriptional regulator Fis | |||
| 6455 | DUF1382 family protein | |||
| 6460 | M | M.SspPIBORF6330P (100% identity) | GATC | M.EcoC4071ORF6460P |
| 6465 | PerC family transcriptional regulator | |||
| 12105 | DUF977 family protein | |||
| 12110 | M | M.EcoC4070ORF12110P (100% identity) | M.EcoC4071ORF12110P | |
| 12115 | 139 aa hypothetical protein | |||
| 14080 | Shiga toxin Stx2e subunit A | |||
| 14100 | M | M.EcoW1316ORF2195P (100% identity) | M.EcoC4071ORF14100P | |
| 14105 | TrmB family transcriptional regulator | |||
| 15780 | 92 aa hypothetical protein | |||
| 15785 | M | M.EcoW26ORF35400P (100% identity) | M.EcoC4071ORF15785P | |
| 15790 | TrmB family transcriptional regulator | |||
| plasmid unnamed1 | ||||
| 24975 | 73 aa hypothetical protein | |||
| 24980 | M | M.StyR64ORFAP (100% identity) | M.EcoC4071ORF24980P | |
| 24985 | 103 aa hypothetical protein | |||