Escherichia coli ETEC4069 |
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Putative Escherichia coli ETEC4069 RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
Complete sequence: 5,096,203 bp
GenBank #: CP122679
REBASE acronym: EcoC4069
Org_num: 67367
All begin QDW53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 5765 | IS1 family transposase | |||
| 5770 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | EcoC4069ORF5780P |
| 5775 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.EcoC4069ORF5780P |
| 5780 | M | M.SenS688ORF13495P (100% identity) | ACAYNNNNCTG | M.EcoC4069ORF5780P |
| 5785 | integrase core domain-containing protein | |||
| 15350 | GTPase family protein | |||
| 15355 | M | M.EcoW1316ORF930P (100% identity) | M.EcoC4069ORF15355P | |
| 15360 | S | S.EcoW1316ORF930P (100% identity) | S.EcoC4069ORF15355P | |
| 15365 | R | EcoW1316ORF930P (100% identity) | EcoC4069ORF15355P | |
| 15370 | IS5-like element ISKpn26 family transposase | |||
| 19475 | type IV toxin-antitoxin system AbiEi family | |||
| 19480 | R | EcoP1525ORF5305P (100% identity) | CAACNNNNGTT | EcoC4069ORF19485P |
| 19485 | M | M.EcoW1316ORF21120P (100% identity) | CAACNNNNGTT | M.EcoC4069ORF19485P |
| 19490 | S | S.EcoW1316ORF21120P (100% identity) | CAACNNNNGTT | S.EcoC4069ORF19485P |
| 19495 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1770 | cell division protein DamX | |||
| 1775 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC4069DamP |
| 1780 | ribulose-phosphate 3-epimerase | |||
| 2300 | DUF2556 family protein | |||
| 2305 | M | M.EcoW1316ORF13330P (100% identity) | ATGCAT | M.EcoC4069ORF2305P |
| 2310 | DNA-binding transcriptional regulator Fis | |||
| 6160 | Com family DNA-binding transcriptional | |||
| 6165 | M | M.Ecor024ORF22975P (100% identity) | M.EcoC4069ORF6165P | |
| 6170 | ribosome-associated translation inhibitor RaiA | |||
| 6660 | DUF1382 family protein | |||
| 6665 | M | M.SspPIBORF6330P (100% identity) | GATC | M.EcoC4069ORF6665P |
| 6670 | PerC family transcriptional regulator | |||
| 12280 | DUF977 family protein | |||
| 12285 | M | M.EcoC4071ORF12110P (100% identity) | M.EcoC4069ORF12285P | |
| 12290 | 139 aa hypothetical protein | |||
| 14070 | Shiga toxin Stx2e subunit A | |||
| 14090 | M | M.EcoW1316ORF2195P (100% identity) | M.EcoC4069ORF14090P | |
| 14095 | TrmB family transcriptional regulator | |||
| 15770 | 92 aa hypothetical protein | |||
| 15775 | M | M.EcoW26ORF35400P (100% identity) | M.EcoC4069ORF15775P | |
| 15780 | TrmB family transcriptional regulator | |||
| 23080 | phage lysis protein EssD | |||
| 23085 | M | M.Sso63633ORF22290P (100% identity) | M.EcoC4069ORF23085P | |
| 23090 | 67 aa hypothetical protein | |||
| 23115 | LexA family transcriptional regulator | |||
| 23120 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoC4069ORF23120P |
| 23125 | PerC family transcriptional regulator | |||