Escherichia coli ETEC1707F |
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Putative Escherichia coli ETEC1707F RM systems
Ref: Vereecke,N. et al. Front Microbiol 14, 1139312 (2023)
REBASE ref # 36777
| Sequence length: | GenBank #: | |
| Chromosome: | 4,997,915 bp | CP122895 |
| plasmid unnamed3: | 93,943 bp | CP122898 |
| plasmid unnamed4: | 227,033 bp | CP122899 |
| plasmid unnamed5: | 90,277 bp | CP122900 |
REBASE acronym: Eco1707F
Org_num: 67335
All begin QDX15_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1685 | cell division protein DamX | |||
| 1690 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco1707FDamP |
| 1695 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco1707FORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 5525 | TraR/DksA family transcriptional regulator | |||
| 5530 | M | M.Sen6004ORF13105P (68% identity) | M.Eco1707FORF5530P | |
| 5535 | phage tail sheath subtilisin-like | |||
| 5955 | Com family DNA-binding transcriptional | |||
| 5960 | M | M.SenYU39ORF1896P (100% identity) | M.Eco1707FORF5960P | |
| 5965 | ribosome-associated translation inhibitor RaiA | |||
| 6495 | HigA family addiction module antitoxin | |||
| 6500 | RM | EcoP3ORF3010P (100% identity) | Eco1707FORF6500P | |
| 6505 | DEAD/DEAH box helicase | |||
| 7410 | recombination protein NinB | |||
| 7415 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco1707FORF7415P |
| 7420 | NinE family protein | |||
| 9750 | phosphohydrolase | |||
| 9755 | M | M.EcosPA11DcmP (100% identity) | CCWGG | M.Eco1707FDcmP |
| 9760 | V | V.EcosPA11DcmP (100% identity) | V.Eco1707FDcmP | |
| 9765 | drug/metabolite exporter YedA | |||
| 14550 | Shiga toxin Stx2e subunit A | |||
| 14570 | M | M.EcoC1730ORF14040P (100% identity) | M.Eco1707FORF14570P | |
| 14575 | TrmB family transcriptional regulator | |||
| 17275 | replication endonuclease | |||
| 17280 | M | M.EcoCPF6ORF21970P (100% identity) | GATC | M.Eco1707FORF17280P |
| 17285 | TraR/DksA family transcriptional regulator | |||
| 19975 | DUF1317 family protein | |||
| 19980 | M | M.Sbo812ORFAP (99% identity) | M.Eco1707FORF19980P | |
| 19985 | cell division protein ZapA | |||
| 20005 | site-specific integrase | |||
| 20010 | R | Sso8033ORF3755P (99% identity) | CCWGG | Eco1707FORF20015P |
| 20015 | M | M.Sso8033ORF3755P (100% identity) | CCWGG | M.Eco1707FORF20015P |
| 20020 | tail fiber assembly protein | |||
| plasmid unnamed3 | ||||
| 26295 | glutamine--tRNA ligase | |||
| ??? | M | M.SenYU39ORF5083P (100% identity) | M.Eco1707FORF26300P | |
| 26305 | 206 aa hypothetical protein | |||
| plasmid unnamed4 | ||||
| 26585 | 55 aa hypothetical protein | |||
| 26590 | M | M.YpsF1ORFCP (100% identity) | CCWGG | M.Eco1707FORF26590P |
| 26595 | thermonuclease family protein | |||
| 26865 | DNA-binding protein | |||
| 26870 | M | M.YpsF1ORFDP (100% identity) | GATC | M.Eco1707FORF26870P |
| 26875 | 284 aa hypothetical protein | |||
| plasmid unnamed5 | ||||
| 27765 | 73 aa hypothetical protein | |||
| 27770 | M | M.SflN101ORF24625P (100% identity) | M.Eco1707FORF27770P | |
| 27775 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15290 | isocitrate/isopropylmalate family dehydrogenase | |||
| 15295 | R | Ecos671McrCP (100% identity) | Eco1707FMcrCP | |
| 15300 | R | EcoGR02AMcrBP (100% identity) | Eco1707FMcrBP | |
| 15305 | tail fiber assembly protein | |||