Escherichia coli AVS0533 |
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Putative Escherichia coli AVS0533 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 5,090,642 bp | CP124343 |
| plasmid pAVS0533-A: | 146,629 bp | CP124344 |
REBASE acronym: EcoS0533
Org_num: 67298
All begin QJP85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18690 | type IV toxin-antitoxin system AbiEi family | |||
| 18695 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | EcoS0533ORF18700P |
| 18700 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.EcoS0533ORF18700P |
| 18705 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.EcoS0533ORF18700P |
| 18710 | ash family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1705 | cell division protein DamX | |||
| 1710 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS0533DamP |
| 1715 | ribulose-phosphate 3-epimerase | |||
| 2325 | DUF2556 family protein | |||
| 2330 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoS0533ORF2330P |
| 2335 | DNA-binding transcriptional regulator Fis | |||
| 10270 | phosphohydrolase | |||
| 10275 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoS0533DcmP |
| 10280 | V | V.SflC32DcmP (74% identity) | CCWGG | V.EcoS0533DcmP |
| 10285 | drug/metabolite exporter YedA | |||
| 14465 | DUF3927 family protein | |||
| 14480 | M | M.Ecos131ORF2315P (100% identity) | A | M.EcoS0533ORF14480P |
| 14485 | TrmB family transcriptional regulator | |||
| 20620 | McrC family protein | |||
| 20625 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoS0533ORF20630P |
| 20630 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoS0533ORF20630P |
| 20635 | M | M1.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoS0533ORF20630P |
| 20640 | helix-turn-helix domain-containing protein | |||
| 20905 | 174 aa hypothetical protein | |||
| 20910 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoS0533ORF20910P |
| 20915 | ATP-binding protein | |||
| 20920 | response regulator receiver domain | |||
| 20925 | R | Ecos19ORF20635P (100% identity) | EcoS0533ORF20925P | |
| 20930 | 97 aa hypothetical protein | |||
| plasmid pAVS0533-A | ||||
| 25465 | 73 aa hypothetical protein | |||
| 25470 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoS0533ORF25470P |
| 25475 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10070 | shufflon system plasmid conjugative transfer | |||
| 10075 | R | Ecost88ORF24685P (100% identity) | EcoS0533ORF10080P | |
| 10080 | M | M.EcosS2ORF3675P (100% identity) | M.EcoS0533ORF10080P | |
| 10085 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20610 | glycosyltransferase | |||
| 20615 | R | EcosS3McrBP (100% identity) | EcoS0533McrBP | |
| 20620 | R | EcosS9McrCP (100% identity) | EcoS0533McrCP | |
| 20625 | Alw26I/Eco31I/Esp3I family type II restriction | |||